BLASTX nr result

ID: Glycyrrhiza28_contig00007720 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00007720
         (242 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P11894.2 RecName: Full=50S ribosomal protein L9, chloroplastic; ...    55   3e-07
XP_003606325.1 50S ribosomal protein L9 [Medicago truncatula] AC...    51   7e-06

>P11894.2 RecName: Full=50S ribosomal protein L9, chloroplastic; AltName:
           Full=CL9; Flags: Precursor CAA32184.1 unnamed protein
           product [Pisum sativum]
          Length = 194

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +1

Query: 136 QHSFAGNSKGSSQFSNKSAGLLVFAQKKSKKTRKI 240
           QHSFA N K  SQF NKS+G +VFAQKK+KKTRKI
Sbjct: 15  QHSFAANLKTCSQFPNKSSGFMVFAQKKTKKTRKI 49


>XP_003606325.1 50S ribosomal protein L9 [Medicago truncatula] ACJ83322.1 unknown
           [Medicago truncatula] AES88522.1 50S ribosomal protein
           L9 [Medicago truncatula] AFK35707.1 unknown [Medicago
           truncatula]
          Length = 192

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +1

Query: 136 QHSFAGNSKGSSQFSNKSAGLLVFAQKKSKKTRKI 240
           QHSF  N   SSQFSNK++  L+FAQKK+KKTRKI
Sbjct: 13  QHSFTSNLNTSSQFSNKTSRFLIFAQKKAKKTRKI 47


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