BLASTX nr result

ID: Glycyrrhiza28_contig00006451 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00006451
         (349 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAD66717.1 orf169 (mitochondrion) [Beta vulgaris subsp. vulgaris]      54   1e-13
NP_064093.1 orf211 gene product (mitochondrion) [Beta vulgaris s...    52   4e-13
YP_004222334.1 hypothetical protein BevumaM_p100 (mitochondrion)...    52   4e-13

>BAD66717.1 orf169 (mitochondrion) [Beta vulgaris subsp. vulgaris]
          Length = 169

 Score = 53.9 bits (128), Expect(2) = 1e-13
 Identities = 35/73 (47%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = +2

Query: 56  MSKMGPDRQPTTGTSFALARLTPACLLP-----TIVNFKKDPSFHYSWNLTDLLGQSL*A 220
           MSKMG DRQPTTGT FALA L P CLLP     T+    +  S  YS             
Sbjct: 1   MSKMGSDRQPTTGTCFALAPLIPTCLLPTKARVTLAGTSQTFSVCYS------------T 48

Query: 221 GVSASFTFPSQSP 259
           G  ASFT P Q P
Sbjct: 49  GAPASFTPPPQKP 61



 Score = 49.3 bits (116), Expect(2) = 1e-13
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +1

Query: 250 PKSVGPTTTRGNHTWTNEISLSLTFWRQKPVSP 348
           PKSVGPTTTR NHT TNEI LSL F+  KPVSP
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSP 92


>NP_064093.1 orf211 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           BAA99486.1 orf211 (mitochondrion) [Beta vulgaris subsp.
           vulgaris]
          Length = 211

 Score = 52.4 bits (124), Expect(2) = 4e-13
 Identities = 34/73 (46%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = +2

Query: 56  MSKMGPDRQPTTGTSFALARLTPACLLP-----TIVNFKKDPSFHYSWNLTDLLGQSL*A 220
           MSKMG DRQPTTGT FALA L P CLLP     T+    +  S  YS             
Sbjct: 1   MSKMGSDRQPTTGTCFALAPLIPTCLLPTKARVTLAGTSQTFSVCYS------------T 48

Query: 221 GVSASFTFPSQSP 259
           G  ASFT P + P
Sbjct: 49  GAPASFTPPPKKP 61



 Score = 49.3 bits (116), Expect(2) = 4e-13
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +1

Query: 250 PKSVGPTTTRGNHTWTNEISLSLTFWRQKPVSP 348
           PKSVGPTTTR NHT TNEI LSL F+  KPVSP
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSP 92


>YP_004222334.1 hypothetical protein BevumaM_p100 (mitochondrion) [Beta vulgaris
           subsp. maritima] YP_004842140.1 hypothetical protein
           BemaM_p096 (mitochondrion) [Beta macrocarpa] CBJ14065.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima] CBJ17556.1 hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
           CBJ20726.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBX24945.1 hypothetical
           protein (mitochondrion) [Beta macrocarpa] CBL51974.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 169

 Score = 52.4 bits (124), Expect(2) = 4e-13
 Identities = 34/73 (46%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = +2

Query: 56  MSKMGPDRQPTTGTSFALARLTPACLLP-----TIVNFKKDPSFHYSWNLTDLLGQSL*A 220
           MSKMG DRQPTTGT FALA L P CLLP     T+    +  S  YS             
Sbjct: 1   MSKMGSDRQPTTGTCFALAPLIPTCLLPTKARVTLAGTSQTFSVCYS------------T 48

Query: 221 GVSASFTFPSQSP 259
           G  ASFT P + P
Sbjct: 49  GAPASFTPPPKKP 61



 Score = 49.3 bits (116), Expect(2) = 4e-13
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +1

Query: 250 PKSVGPTTTRGNHTWTNEISLSLTFWRQKPVSP 348
           PKSVGPTTTR NHT TNEI LSL F+  KPVSP
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSP 92


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