BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00006056
         (278 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_050400699.1 LysR family transcriptional regulator [Bradyrhizo...   169   2e-50
SED74902.1 DNA-binding transcriptional regulator, LysR family [B...   168   5e-50
WP_076825241.1 LysR family transcriptional regulator [Bradyrhizo...   166   4e-49
WP_057016427.1 LysR family transcriptional regulator [Bradyrhizo...   166   5e-49
SCK55111.1 DNA-binding transcriptional regulator, LysR family [V...   136   2e-37
SEA04603.1 DNA-binding transcriptional regulator, LysR family [V...   135   3e-37
WP_019653520.1 hypothetical protein [Variovorax paradoxus]            132   9e-36
WP_056574571.1 LysR family transcriptional regulator [Variovorax...   132   1e-35
WP_070061376.1 LysR family transcriptional regulator [Variovorax...   132   1e-35
WP_062470380.1 LysR family transcriptional regulator [Variovorax...   132   1e-35
SET44959.1 DNA-binding transcriptional regulator, LysR family [V...   132   1e-35
SDZ08048.1 DNA-binding transcriptional regulator, LysR family [V...   132   1e-35
SDY42316.1 DNA-binding transcriptional regulator, LysR family [V...   132   1e-35
WP_057592358.1 LysR family transcriptional regulator [Variovorax...   130   3e-35
SCX70262.1 DNA-binding transcriptional regulator, LysR family [V...   130   3e-35
SEK16080.1 DNA-binding transcriptional regulator, LysR family [V...   130   5e-35
SFO61729.1 DNA-binding transcriptional regulator, LysR family [V...   128   4e-34
SEK60968.1 DNA-binding transcriptional regulator, LysR family [V...   127   6e-34
ODU15875.1 LysR family transcriptional regulator [Variovorax sp....   127   7e-34
OAK64891.1 LysR family transcriptional regulator [Variovorax par...   127   1e-33

>WP_050400699.1 LysR family transcriptional regulator [Bradyrhizobium embrapense]
          Length = 306

 Score =  169 bits (428), Expect = 2e-50
 Identities = 82/92 (89%), Positives = 87/92 (94%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           RRGRGVAPTDAGQLLAAYLHRQQ ERQAL AQMD IRKVE+GHID+VTGEGYVDWLAK+S
Sbjct: 54  RRGRGVAPTDAGQLLAAYLHRQQGERQALLAQMDSIRKVESGHIDLVTGEGYVDWLAKSS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           LCRFMQAHPKIT+SLDIGSTDEIVQ +VGE A
Sbjct: 114 LCRFMQAHPKITVSLDIGSTDEIVQQIVGENA 145


>SED74902.1 DNA-binding transcriptional regulator, LysR family [Bradyrhizobium
           erythrophlei]
          Length = 306

 Score =  168 bits (426), Expect = 5e-50
 Identities = 83/92 (90%), Positives = 86/92 (93%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           RRGRGVAPTDAGQLLAAYLHRQQ ERQAL AQMD IRKVE+GHID+VTGEGYVDWLAK+ 
Sbjct: 54  RRGRGVAPTDAGQLLAAYLHRQQGERQALLAQMDSIRKVESGHIDLVTGEGYVDWLAKSC 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           LCRFMQ HPKITISLDIGSTDEIVQ VVGERA
Sbjct: 114 LCRFMQTHPKITISLDIGSTDEIVQQVVGERA 145


>WP_076825241.1 LysR family transcriptional regulator [Bradyrhizobium sp. UFLA
           03-321] OMI14414.1 LysR family transcriptional regulator
           [Bradyrhizobium sp. UFLA 03-321]
          Length = 306

 Score =  166 bits (420), Expect = 4e-49
 Identities = 82/92 (89%), Positives = 87/92 (94%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           RRGRGVAPTDAGQLLAAYL RQQ ERQAL AQ+D IRKVE+GHID+VTGEGYVDWLAK+S
Sbjct: 54  RRGRGVAPTDAGQLLAAYLQRQQGERQALLAQIDSIRKVESGHIDLVTGEGYVDWLAKSS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           LCRFMQ+HPKITISLDIGSTDEIVQ VVGERA
Sbjct: 114 LCRFMQSHPKITISLDIGSTDEIVQQVVGERA 145


>WP_057016427.1 LysR family transcriptional regulator [Bradyrhizobium pachyrhizi]
           KRQ09757.1 LysR family transcriptional regulator
           [Bradyrhizobium pachyrhizi]
          Length = 306

 Score =  166 bits (419), Expect = 5e-49
 Identities = 81/92 (88%), Positives = 87/92 (94%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           RRGRGVAPTDAGQLLAAYL RQQ ERQAL AQ+D IRKVE+GHID+VTGEGY+DWLAK+S
Sbjct: 54  RRGRGVAPTDAGQLLAAYLQRQQGERQALLAQIDSIRKVESGHIDLVTGEGYIDWLAKSS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           LCRFMQ+HPKITISLDIGSTDEIVQ VVGERA
Sbjct: 114 LCRFMQSHPKITISLDIGSTDEIVQQVVGERA 145


>SCK55111.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           HW608]
          Length = 318

 Score =  136 bits (343), Expect = 2e-37
 Identities = 64/92 (69%), Positives = 78/92 (84%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           RRGRGVAPTDAG LLA+YL RQQS++Q L AQ D IRK+E GHID+V GEG+VDWL + S
Sbjct: 54  RRGRGVAPTDAGDLLASYLRRQQSQKQHLLAQFDSIRKIERGHIDIVAGEGFVDWLMRNS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FMQ+HP+ITI+LD+GS+DEIV+ +V ERA
Sbjct: 114 LRTFMQSHPRITIALDVGSSDEIVKRIVDERA 145


>SEA04603.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           YR216]
          Length = 314

 Score =  135 bits (341), Expect = 3e-37
 Identities = 63/92 (68%), Positives = 78/92 (84%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           RRGRGV PTDAG LLA+YL RQQS++Q L AQ+D IRK+E GHID+V GEG+VDWL + S
Sbjct: 54  RRGRGVVPTDAGDLLASYLRRQQSQKQHLLAQLDSIRKIERGHIDIVAGEGFVDWLMRNS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FMQ+HP+ITI+LD+GS+DEIV+ +V ERA
Sbjct: 114 LRTFMQSHPRITIALDVGSSDEIVKRIVDERA 145


>WP_019653520.1 hypothetical protein [Variovorax paradoxus]
          Length = 309

 Score =  132 bits (331), Expect = 9e-36
 Identities = 63/92 (68%), Positives = 73/92 (79%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAGQ+LA Y+ RQ S++Q L AQ+D IRK+E GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGQMLAGYVRRQNSQKQHLMAQLDSIRKIERGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM +HPKITI LD+ STDEIVQ VV ERA
Sbjct: 114 LRDFMTSHPKITIDLDVASTDEIVQRVVEERA 145


>WP_056574571.1 LysR family transcriptional regulator [Variovorax sp. Root473]
           KQX91198.1 LysR family transcriptional regulator
           [Variovorax sp. Root473]
          Length = 323

 Score =  132 bits (331), Expect = 1e-35
 Identities = 62/92 (67%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAGQLLA Y+ RQQ ++Q L AQMD IRK+E+GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGQLLAGYVRRQQGQKQHLLAQMDSIRKIESGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM +HPKIT++LD+ STDEIV+ V+ ERA
Sbjct: 114 LRIFMASHPKITVNLDVASTDEIVRRVIEERA 145


>WP_070061376.1 LysR family transcriptional regulator [Variovorax boronicumulans]
           OEZ28085.1 LysR family transcriptional regulator
           [Variovorax boronicumulans]
          Length = 325

 Score =  132 bits (331), Expect = 1e-35
 Identities = 62/92 (67%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAGQLLA Y+ RQQ ++Q L AQMD IRK+E+GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGQLLAGYVRRQQGQKQHLLAQMDSIRKIESGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM +HPKIT++LD+ STDEIV+ V+ ERA
Sbjct: 114 LRIFMASHPKITVNLDVASTDEIVRRVIEERA 145


>WP_062470380.1 LysR family transcriptional regulator [Variovorax boronicumulans]
          Length = 325

 Score =  132 bits (331), Expect = 1e-35
 Identities = 62/92 (67%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAGQLLA Y+ RQQ ++Q L AQMD IRK+E+GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGQLLAGYVRRQQGQKQHLLAQMDSIRKIESGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM +HPKIT++LD+ STDEIV+ V+ ERA
Sbjct: 114 LRIFMASHPKITVNLDVASTDEIVRRVIEERA 145


>SET44959.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           OV084]
          Length = 328

 Score =  132 bits (331), Expect = 1e-35
 Identities = 64/92 (69%), Positives = 72/92 (78%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAG++LA Y+ RQ S++Q L AQMD IRK+E GHIDVV GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGEMLAGYVRRQNSQKQHLMAQMDSIRKIERGHIDVVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HPKITI LD+ STDEIVQ VV ERA
Sbjct: 114 LRDFMTTHPKITIDLDVASTDEIVQRVVEERA 145


>SDZ08048.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           YR266]
          Length = 328

 Score =  132 bits (331), Expect = 1e-35
 Identities = 64/92 (69%), Positives = 72/92 (78%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAG++LA Y+ RQ S++Q L AQMD IRK+E GHIDVV GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGEMLAGYVRRQNSQKQHLMAQMDSIRKIERGHIDVVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HPKITI LD+ STDEIVQ VV ERA
Sbjct: 114 LRDFMTTHPKITIDLDVASTDEIVQRVVEERA 145


>SDY42316.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           YR634]
          Length = 328

 Score =  132 bits (331), Expect = 1e-35
 Identities = 64/92 (69%), Positives = 72/92 (78%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAG++LA Y+ RQ S++Q L AQMD IRK+E GHIDVV GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGEMLAGYVRRQNSQKQHLMAQMDSIRKIERGHIDVVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HPKITI LD+ STDEIVQ VV ERA
Sbjct: 114 LRDFMTTHPKITIDLDVASTDEIVQRVVEERA 145


>WP_057592358.1 LysR family transcriptional regulator [Variovorax paradoxus]
           KPU98602.1 LysR family transcriptional regulator
           [Variovorax paradoxus] KPV06519.1 LysR family
           transcriptional regulator [Variovorax paradoxus]
           KPV08425.1 LysR family transcriptional regulator
           [Variovorax paradoxus] KPV21970.1 LysR family
           transcriptional regulator [Variovorax paradoxus]
           KPV32012.1 LysR family transcriptional regulator
           [Variovorax paradoxus] KPV36369.1 LysR family
           transcriptional regulator [Variovorax paradoxus]
          Length = 320

 Score =  130 bits (328), Expect = 3e-35
 Identities = 62/92 (67%), Positives = 72/92 (78%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAG++LA Y+ RQ S++Q L AQMD IRK+E GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGEMLAGYVRRQNSQKQHLMAQMDSIRKIERGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HPKITI LD+ STDEIV+ VV ERA
Sbjct: 114 LREFMTTHPKITIDLDVASTDEIVRRVVEERA 145


>SCX70262.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           EL159]
          Length = 322

 Score =  130 bits (328), Expect = 3e-35
 Identities = 62/92 (67%), Positives = 73/92 (79%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAGQ+LA Y+ RQQ+++Q L AQMD IRK+E GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGQMLAGYVRRQQNQKQHLLAQMDSIRKIERGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HPKITI LD+ STDEIV+ +V ERA
Sbjct: 114 LRDFMTTHPKITIDLDVASTDEIVRRIVEERA 145


>SEK16080.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           OK202] SFQ63980.1 DNA-binding transcriptional regulator,
           LysR family [Variovorax sp. OK605] SFE31569.1
           DNA-binding transcriptional regulator, LysR family
           [Variovorax sp. OK212]
          Length = 329

 Score =  130 bits (327), Expect = 5e-35
 Identities = 61/92 (66%), Positives = 72/92 (78%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAG++LA Y+ RQ S++Q L AQMD IRK+E GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGEMLAGYVRRQNSQKQHLMAQMDSIRKIERGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HPKIT+ LD+ STDEIV+ VV ERA
Sbjct: 114 LREFMTTHPKITVELDVASTDEIVRRVVEERA 145


>SFO61729.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           PDC80]
          Length = 322

 Score =  128 bits (321), Expect = 4e-34
 Identities = 61/92 (66%), Positives = 71/92 (77%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV PTDAG++LA Y+ RQ S++Q L AQMD IRK+E GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVPTDAGEMLAGYVRRQNSQKQHLMAQMDSIRKIERGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HP ITI LD+ STDEIV+ VV ERA
Sbjct: 114 LREFMTTHPGITIDLDVASTDEIVRRVVEERA 145


>SEK60968.1 DNA-binding transcriptional regulator, LysR family [Variovorax sp.
           YR750]
          Length = 333

 Score =  127 bits (320), Expect = 6e-34
 Identities = 62/92 (67%), Positives = 71/92 (77%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV  TDAGQ+LA Y+ RQ S++Q L AQMD IRK+E GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVIATDAGQMLAGYVRRQNSQKQHLMAQMDGIRKIERGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HP+ITI LD+ STDEIVQ VV ERA
Sbjct: 114 LRDFMTTHPRITIDLDVASTDEIVQRVVEERA 145


>ODU15875.1 LysR family transcriptional regulator [Variovorax sp. SCN 67-85]
           ODV21366.1 LysR family transcriptional regulator
           [Variovorax sp. SCN 67-20] OJZ14069.1 LysR family
           transcriptional regulator [Variovorax sp. 67-131]
          Length = 322

 Score =  127 bits (319), Expect = 7e-34
 Identities = 62/92 (67%), Positives = 71/92 (77%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV  TDAG++LA Y+ RQ S++Q L AQMD IRK+E GHIDVV GEGYVDWL + S
Sbjct: 54  RHGRGVVATDAGEMLAGYVRRQNSQKQHLMAQMDSIRKIERGHIDVVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HPKITI LD+ STDEIV+ VV ERA
Sbjct: 114 LRDFMTTHPKITIELDVASTDEIVRRVVEERA 145


>OAK64891.1 LysR family transcriptional regulator [Variovorax paradoxus]
          Length = 322

 Score =  127 bits (318), Expect = 1e-33
 Identities = 61/92 (66%), Positives = 71/92 (77%)
 Frame = -2

Query: 277 RRGRGVAPTDAGQLLAAYLHRQQSERQALQAQMDRIRKVETGHIDVVTGEGYVDWLAKTS 98
           R GRGV  TDAG++LA Y+ RQ S++Q L AQMD IRK+E GHID+V GEGYVDWL + S
Sbjct: 54  RHGRGVVATDAGEMLAGYVRRQNSQKQHLMAQMDSIRKIERGHIDIVAGEGYVDWLMRHS 113

Query: 97  LCRFMQAHPKITISLDIGSTDEIVQHVVGERA 2
           L  FM  HPKITI LD+ STDEIV+ VV ERA
Sbjct: 114 LRDFMTTHPKITIELDVASTDEIVRRVVEERA 145