BLASTX nr result
ID: Glycyrrhiza28_contig00004459
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00004459
(283 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterran... 54 6e-09
KHN05285.1 Retrovirus-related Pol polyprotein from transposon TN... 54 6e-08
AJY78067.1 putative polyprotein [Glycine max] 54 6e-08
GAU46782.1 hypothetical protein TSUD_351810 [Trifolium subterran... 53 8e-08
GAU31769.1 hypothetical protein TSUD_22150 [Trifolium subterraneum] 53 2e-07
GAU44842.1 hypothetical protein TSUD_400430 [Trifolium subterran... 48 3e-07
GAU45704.1 hypothetical protein TSUD_86800 [Trifolium subterraneum] 52 6e-07
GAU41868.1 hypothetical protein TSUD_366150 [Trifolium subterran... 44 3e-06
>GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterraneum]
Length = 1469
Score = 53.5 bits (127), Expect(2) = 6e-09
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = -2
Query: 168 RIQKLQTVFPFVNVDENSACDICHYTKHRKXXXXXXXXXXXXXXXXLHFDIWGLVS 1
++ LQ+VFPF+ VD CDICH KH+K +HFDIWG ++
Sbjct: 512 KMSLLQSVFPFITVDNKGVCDICHLAKHKKLYYKVSMNKATVPYELIHFDIWGPIA 567
Score = 33.9 bits (76), Expect(2) = 6e-09
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 281 YLKMDSRKVNSTRREEEDAFYLPQAALWHFRLRHLSN 171
YL + S++V++ + +P ALWHFRL H SN
Sbjct: 474 YLTLTSKEVHAHSIDGTQHTNIPDQALWHFRLGHTSN 510
>KHN05285.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1346
Score = 53.9 bits (128), Expect(2) = 6e-08
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = -2
Query: 180 LVKQRIQKLQTVFPFVNVDENSACDICHYTKHRKXXXXXXXXXXXXXXXXLHFDIWGLVS 1
L RI L + FPF+ D +S CDICH+ KHRK +HFDIWG +S
Sbjct: 443 LSSSRIALLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPIS 502
Score = 30.0 bits (66), Expect(2) = 6e-08
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -3
Query: 221 YLPQAALWHFRLRHLSN 171
++P+ A+WHFRL HLS+
Sbjct: 429 HIPENAIWHFRLGHLSS 445
>AJY78067.1 putative polyprotein [Glycine max]
Length = 886
Score = 53.9 bits (128), Expect(2) = 6e-08
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = -2
Query: 180 LVKQRIQKLQTVFPFVNVDENSACDICHYTKHRKXXXXXXXXXXXXXXXXLHFDIWGLVS 1
L RI L + FPF+ D +S CDICH+ KHRK +HFDIWG +S
Sbjct: 539 LSSSRIALLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPIS 598
Score = 30.0 bits (66), Expect(2) = 6e-08
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -3
Query: 221 YLPQAALWHFRLRHLSN 171
++P+ A+WHFRL HLS+
Sbjct: 525 HIPENAIWHFRLGHLSS 541
>GAU46782.1 hypothetical protein TSUD_351810 [Trifolium subterraneum]
Length = 1512
Score = 52.8 bits (125), Expect(2) = 8e-08
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = -2
Query: 168 RIQKLQTVFPFVNVDENSACDICHYTKHRKXXXXXXXXXXXXXXXXLHFDIWGLVS 1
R+ +Q+ FPFV +DE++ CDICH +H+K +HFDIWG S
Sbjct: 549 RLLLMQSSFPFVTIDEHAVCDICHLARHKKLTYKLSVNKASHCGELIHFDIWGPTS 604
Score = 30.8 bits (68), Expect(2) = 8e-08
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -3
Query: 221 YLPQAALWHFRLRHLSN 171
++P+ ALWHFRL HLS+
Sbjct: 531 HIPKQALWHFRLGHLSH 547
>GAU31769.1 hypothetical protein TSUD_22150 [Trifolium subterraneum]
Length = 1372
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = -2
Query: 168 RIQKLQTVFPFVNVDENSACDICHYTKHRKXXXXXXXXXXXXXXXXLHFDIWGLVS 1
++ LQ+VFPF+ VD CDICH KH+K +HFDIWG ++
Sbjct: 471 KMSLLQSVFPFIAVDNKGVCDICHLAKHKKLYYKVSMNKAYVPYELIHFDIWGPIA 526
Score = 29.3 bits (64), Expect(2) = 2e-07
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 281 YLKMDSRKVNSTRREEEDAFYLPQAALWHFRLRHLSN 171
YL + S +V++ + +P ALW FRL H SN
Sbjct: 433 YLTLTSEEVHAHNIDGTQHTNIPDQALWLFRLGHTSN 469
>GAU44842.1 hypothetical protein TSUD_400430 [Trifolium subterraneum]
Length = 1289
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 168 RIQKLQTVFPFVNVDENSACDICHYTKHRKXXXXXXXXXXXXXXXXLHFDIWGLVS 1
R+ L + FPF+ +D CDICH +H+K LHFDIWG ++
Sbjct: 481 RMHLLHSQFPFITLDNKGVCDICHLARHKKIPYNTSMNKVAFPYDVLHFDIWGPIA 536
Score = 33.5 bits (75), Expect(2) = 3e-07
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 281 YLKMDSRKVNSTRREEEDAFYLPQAALWHFRLRHLS 174
YLK+ S+ ++ + D + + ALWHFRL H+S
Sbjct: 443 YLKLTSKDAHAYAVDSSDKSTILEPALWHFRLGHIS 478
>GAU45704.1 hypothetical protein TSUD_86800 [Trifolium subterraneum]
Length = 902
Score = 51.6 bits (122), Expect(2) = 6e-07
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -2
Query: 180 LVKQRIQKLQTVFPFVNVDENSACDICHYTKHRKXXXXXXXXXXXXXXXXLHFDIWGLVS 1
L R+ +++ FPFVNVD N CD+C Y K RK LHFDIWG ++
Sbjct: 536 LSTSRMISMRSEFPFVNVDNNVVCDVCKYAKQRKLVFHSSFSKASKPFELLHFDIWGPIA 595
Score = 28.9 bits (63), Expect(2) = 6e-07
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 281 YLKMDSRKVNSTRREEEDAFYLPQAALWHFRLRHLS 174
YL + +++V+++ L +ALWHFRL HLS
Sbjct: 505 YLALQTKEVHASNVSTNS---LLDSALWHFRLGHLS 537
>GAU41868.1 hypothetical protein TSUD_366150 [Trifolium subterraneum]
Length = 792
Score = 43.9 bits (102), Expect(2) = 3e-06
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 168 RIQKLQTVFPFVNVDENSACDICHYTKHRK 79
R+Q L++ FPF++VD S CDICH +H+K
Sbjct: 518 RMQLLKSQFPFISVDNKSVCDICHLARHKK 547
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -3
Query: 281 YLKMDSRKVNSTRREEEDAFYLPQAALWHFRLRHLS 174
YL + ++ V++ + ++P+ ALWHFRL H+S
Sbjct: 480 YLNLTNKDVHAYTADGSHNTHIPEPALWHFRLGHMS 515