BLASTX nr result
ID: Glycyrrhiza28_contig00004250
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00004250
(4197 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AFK38374.1 unknown [Medicago truncatula] 105 8e-24
pir||T06502 hypothetical protein 91 - garden pea chloroplast CAA... 102 2e-22
XP_003616777.1 hypothetical protein MTR_5g084150 [Medicago trunc... 68 9e-19
KJB11124.1 hypothetical protein B456_001G241700 [Gossypium raimo... 87 3e-17
YP_009256027.1 cytochrome b6/f complex subunit VIII (chloroplast... 85 2e-16
KJB68765.1 hypothetical protein B456_011G014300 [Gossypium raimo... 80 7e-15
AFK34392.1 unknown [Lotus japonicus] 78 8e-14
XP_002888353.1 hypothetical protein ARALYDRAFT_893970 [Arabidops... 78 3e-13
AMC31385.1 cytochrome b6/f complex subunit VIII (chloroplast) [G... 72 3e-12
XP_019069816.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 68 8e-11
ANF05123.1 photosystem II protein M (chloroplast) [Cynanchum aur... 68 1e-10
YP_009341770.1 cytochrome b6/f complex subunit VIII (chloroplast... 66 5e-10
KCW58506.1 hypothetical protein EUGRSUZ_H01179 [Eucalyptus grandis] 65 3e-09
KXG32587.1 hypothetical protein SORBI_003G171900 [Sorghum bicolor] 63 5e-09
YP_654205.1 photosystem II M protein (chloroplast) [Oryza sativa... 63 1e-08
XP_018515267.1 PREDICTED: uncharacterized protein LOC108872288 [... 62 1e-08
XP_019105143.1 PREDICTED: uncharacterized protein LOC109135010 [... 61 2e-08
XP_019098150.1 PREDICTED: uncharacterized protein LOC109131543 [... 62 2e-08
XP_002888366.1 hypothetical protein ARALYDRAFT_894017 [Arabidops... 62 3e-08
AFK48586.1 unknown [Medicago truncatula] 61 3e-08
>AFK38374.1 unknown [Medicago truncatula]
Length = 52
Score = 105 bits (262), Expect = 8e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 2970 MGLNPEVFFRN*RERKHRDYGSKYSRIYCYCTLHSSSYCLFTYNLRKNGKSK 2815
MGLNPEVF RN RERKHRDYGS+YSRIY YCTLHSSSYCLFTYNLRKNGKSK
Sbjct: 1 MGLNPEVFIRNKRERKHRDYGSQYSRIYSYCTLHSSSYCLFTYNLRKNGKSK 52
>pir||T06502 hypothetical protein 91 - garden pea chloroplast CAA25831.1
hypothetical protein (chloroplast) [Pisum sativum]
Length = 91
Score = 102 bits (255), Expect = 2e-22
Identities = 52/68 (76%), Positives = 57/68 (83%), Gaps = 3/68 (4%)
Frame = -1
Query: 3405 MYVVQFFPWDCSSIGQSTALSRRKLRVRAPSVPMDTNPI*K-RYQFISCVKG--KKKIIS 3235
MY ++ FPWDCSSIGQSTALSRRKLRVR PSVPMDTNPI K +YQ+ISC+KG K IS
Sbjct: 1 MYTIRLFPWDCSSIGQSTALSRRKLRVRVPSVPMDTNPIKKIKYQWISCMKGNKNKNKIS 60
Query: 3234 FQTGIPFF 3211
F TGIPFF
Sbjct: 61 FLTGIPFF 68
>XP_003616777.1 hypothetical protein MTR_5g084150 [Medicago truncatula] AES99735.1
hypothetical protein MTR_5g084150 [Medicago truncatula]
Length = 187
Score = 67.8 bits (164), Expect(2) = 9e-19
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +1
Query: 3736 ENNKWVISFHGGSANFWAELDLNQRRHIANEFT 3834
+N KWVIS HGGS NFWAELDLNQRRHIANEFT
Sbjct: 6 KNTKWVISLHGGSVNFWAELDLNQRRHIANEFT 38
Score = 57.8 bits (138), Expect(2) = 9e-19
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 3926 YPTPRGSRIPVASLKERCPKPLDDG 4000
YPTPRGSRIPVASLKERCPKPLDDG
Sbjct: 39 YPTPRGSRIPVASLKERCPKPLDDG 63
>KJB11124.1 hypothetical protein B456_001G241700 [Gossypium raimondii]
Length = 56
Score = 87.0 bits (214), Expect = 3e-17
Identities = 44/58 (75%), Positives = 49/58 (84%)
Frame = -2
Query: 4106 MERAF*SNHIIPLILTISKNCSYY*HSIMAVGQVCPHRLVV*DISLSRRQRGFDFPWG 3933
M++AF S+H I ILTISKNCSYY HS++AV QVCPHRLVV D SLSRRQ GFDFPWG
Sbjct: 1 MKKAFGSSHSI--ILTISKNCSYYEHSMVAVRQVCPHRLVVQDTSLSRRQWGFDFPWG 56
>YP_009256027.1 cytochrome b6/f complex subunit VIII (chloroplast) [Scopolia
parviflora] ANF05206.1 cytochrome b6/f complex subunit
VIII (chloroplast) [Scopolia parviflora]
Length = 63
Score = 85.1 bits (209), Expect = 2e-16
Identities = 41/62 (66%), Positives = 48/62 (77%)
Frame = +3
Query: 2142 MK*FLHIDRDRRQKLHGYSKSCLGCFNGRFYIFPFPCSMGKKWTLKVLLIELRDQTVSIV 2321
M+ FL+I RDR +GYSKSCLGCFNG Y FPF S+GK+WTL VLLIELR QTVSI
Sbjct: 1 MEQFLYIYRDRGHNSYGYSKSCLGCFNGSLYFFPFTRSVGKEWTLGVLLIELRKQTVSIS 60
Query: 2322 LS 2327
++
Sbjct: 61 IA 62
>KJB68765.1 hypothetical protein B456_011G014300 [Gossypium raimondii]
Length = 54
Score = 80.1 bits (196), Expect = 7e-15
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = -2
Query: 4106 MERAF*SNHIIPLILTISKNCSYY*HSIMAVGQVCPHRLVV*DISLSRRQRGFDFP 3939
ME+AF S+H I ILTISKNCSYY HS++AV QVCPHRL V D SLSRRQ+GF+FP
Sbjct: 1 MEKAFGSSHSI--ILTISKNCSYYEHSMVAVRQVCPHRLAVQDTSLSRRQQGFNFP 54
>AFK34392.1 unknown [Lotus japonicus]
Length = 74
Score = 77.8 bits (190), Expect = 8e-14
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = -2
Query: 3389 FFPGIVVQLVRAPPCQGGSCGFEPRQSRWIQIQSKK 3282
FFPGIVVQLVRAPPCQGGSCGFE RQSRWIQIQSKK
Sbjct: 6 FFPGIVVQLVRAPPCQGGSCGFESRQSRWIQIQSKK 41
>XP_002888353.1 hypothetical protein ARALYDRAFT_893970 [Arabidopsis lyrata subsp.
lyrata] EFH64612.1 hypothetical protein ARALYDRAFT_893970
[Arabidopsis lyrata subsp. lyrata]
Length = 120
Score = 77.8 bits (190), Expect = 3e-13
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +3
Query: 2805 KLVTLTYRFYVNYK*KGSRN*NEECSSNKCENIYFHNLYVFFLFNF*KILRDLIP 2969
KL+ LT FYVNYK K SRN NEEC SNKC+NIYFHNL V++ + F I RDLIP
Sbjct: 66 KLIILTNGFYVNYKQKSSRNENEECGSNKCKNIYFHNLIVYYYYFFFLISRDLIP 120
Score = 75.9 bits (185), Expect = 1e-12
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = +3
Query: 2151 FLHIDRDRRQKLHGYSKSCLGCFNGRFYIFPFPCSMGKKWTLKVLLIELRDQTVSIVLSL 2330
FLHI R+R Q HGYSKS +GCFNG FYIFP S+GKKWTL++LLI + I+L+
Sbjct: 13 FLHIHRNRGQNSHGYSKSRMGCFNGSFYIFPLSRSVGKKWTLEILLIAIFHLFKLIILTN 72
Query: 2331 G 2333
G
Sbjct: 73 G 73
>AMC31385.1 cytochrome b6/f complex subunit VIII (chloroplast) [Glycyrrhiza
lepidota]
Length = 35
Score = 72.0 bits (175), Expect = 3e-12
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +1
Query: 2170 IGDKSCMDIVSLAWAALMVVFTFSLSLVVWGRSGL 2274
+GDKSCMDIVSLAWAALMVVFTFSLSLVVWGRSGL
Sbjct: 1 MGDKSCMDIVSLAWAALMVVFTFSLSLVVWGRSGL 35
>XP_019069816.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC109120459
[Solanum lycopersicum]
Length = 39
Score = 68.2 bits (165), Expect = 8e-11
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -2
Query: 4043 SYY*HSIMAVGQVCPHRLVV*DISLSRRQRGFDFPWG 3933
SYY HS+MAVGQ PHRLVV DISLSRRQRGF+FPWG
Sbjct: 3 SYYHHSMMAVGQAAPHRLVVXDISLSRRQRGFEFPWG 39
>ANF05123.1 photosystem II protein M (chloroplast) [Cynanchum auriculatum]
Length = 50
Score = 67.8 bits (164), Expect = 1e-10
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -1
Query: 2970 MGLNPEVFFRN*RERKHRDYGSKYSRIYCYCTLHSSSYCLFTYNLRKNGKSK 2815
MGLNPE+ +++K DYGSKYS I CYCT+HSSSY L TY+LRKN +SK
Sbjct: 1 MGLNPELLRS--KKKKRLDYGSKYSCICCYCTIHSSSYRLSTYHLRKNNQSK 50
>YP_009341770.1 cytochrome b6/f complex subunit VIII (chloroplast) [Castanopsis
concinna] ALN96563.1 cytochrome b6/f complex subunit VIII
(chloroplast) [Castanopsis concinna]
Length = 39
Score = 65.9 bits (159), Expect = 5e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +1
Query: 2158 ILIEIGDKSCMDIVSLAWAALMVVFTFSLSLVVWGRSGL 2274
+ +EIGD MDIVSLAWAALMVVFTFSLSLVVWGRSGL
Sbjct: 1 MFMEIGDIIHMDIVSLAWAALMVVFTFSLSLVVWGRSGL 39
>KCW58506.1 hypothetical protein EUGRSUZ_H01179 [Eucalyptus grandis]
Length = 80
Score = 65.1 bits (157), Expect = 3e-09
Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Frame = +1
Query: 931 RKRNLRYKHIKKVK--TPLFLRGGGILIYIFC---IVLAAWPSGKAGDCKSFFPSSNPGV 1095
RKRN R K KK P + G ++FC +LAAWPSGKAGDCKSFFPSSNPGV
Sbjct: 20 RKRNSRCKSNKKRSFGIPHSTQTKGDFFHLFCRVSYILAAWPSGKAGDCKSFFPSSNPGV 79
Query: 1096 A 1098
A
Sbjct: 80 A 80
>KXG32587.1 hypothetical protein SORBI_003G171900 [Sorghum bicolor]
Length = 37
Score = 63.2 bits (152), Expect = 5e-09
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +1
Query: 2188 MDIVSLAWAALMVVFTFSLSLVVWGRSGL*RYY 2286
MDIVSLAWAALMVVFTFSLSLVVWGRSGL YY
Sbjct: 1 MDIVSLAWAALMVVFTFSLSLVVWGRSGLKGYY 33
>YP_654205.1 photosystem II M protein (chloroplast) [Oryza sativa Indica Group]
AAS46045.1 photosystem II M protein (chloroplast) [Oryza
sativa Indica Group]
Length = 68
Score = 62.8 bits (151), Expect = 1e-08
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -1
Query: 2925 KHRDYGSKYSRIYCYCTLHSSSYCLFTYNLRKNGKSK 2815
K R YGS+YSRIYCYC +HSSSYCLFTY L KN + K
Sbjct: 32 KKRGYGSQYSRIYCYCIVHSSSYCLFTYYLCKNSQPK 68
>XP_018515267.1 PREDICTED: uncharacterized protein LOC108872288 [Brassica rapa]
Length = 31
Score = 61.6 bits (148), Expect = 1e-08
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -2
Query: 4025 IMAVGQVCPHRLVV*DISLSRRQRGFDFPWG 3933
+MAV QVCPHRLVV DISLSRRQRGFDFPWG
Sbjct: 1 MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 31
>XP_019105143.1 PREDICTED: uncharacterized protein LOC109135010 [Beta vulgaris subsp.
vulgaris]
Length = 31
Score = 61.2 bits (147), Expect = 2e-08
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -2
Query: 4025 IMAVGQVCPHRLVV*DISLSRRQRGFDFPWG 3933
+MAVG VCPHRL V DISLSRRQRGFDFPWG
Sbjct: 1 MMAVGHVCPHRLAVQDISLSRRQRGFDFPWG 31
>XP_019098150.1 PREDICTED: uncharacterized protein LOC109131543 [Camelina sativa]
Length = 47
Score = 61.6 bits (148), Expect = 2e-08
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -2
Query: 4025 IMAVGQVCPHRLVV*DISLSRRQRGFDFPWG 3933
+MAV QVCPHRLVV DISLSRRQRGFDFPWG
Sbjct: 17 MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 47
>XP_002888366.1 hypothetical protein ARALYDRAFT_894017 [Arabidopsis lyrata subsp.
lyrata] EFH64625.1 hypothetical protein ARALYDRAFT_894017
[Arabidopsis lyrata subsp. lyrata]
Length = 57
Score = 61.6 bits (148), Expect = 3e-08
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -2
Query: 4025 IMAVGQVCPHRLVV*DISLSRRQRGFDFPWG 3933
+MAV QVCPHRLVV DISLSRRQRGFDFPWG
Sbjct: 27 MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 57
>AFK48586.1 unknown [Medicago truncatula]
Length = 29
Score = 60.8 bits (146), Expect = 3e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 3861 MPERLMGTDCKFVGNMSTLVQIQLGPKI 3778
MPERLMGTDCKFVGNMSTLVQIQLGPKI
Sbjct: 1 MPERLMGTDCKFVGNMSTLVQIQLGPKI 28