BLASTX nr result

ID: Glycyrrhiza28_contig00003938 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00003938
         (270 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFK47384.1 unknown [Lotus japonicus]                                   65   2e-10
XP_013457715.1 31 kDa ribonucleoprotein [Medicago truncatula] KE...    62   3e-09
AFK42498.1 unknown [Medicago truncatula]                               62   3e-09
GAU50596.1 hypothetical protein TSUD_186680 [Trifolium subterran...    57   2e-07
XP_004515855.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti...    54   1e-06

>AFK47384.1 unknown [Lotus japonicus]
          Length = 307

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = +1

Query: 139 MSITAMPAFKSLTMAAESCLLSQPSLFSTKTKHPFISNSLKPFK 270
           MSIT MPAFK LT+A ESCLLSQPSLFS+KT++P +SNSLK  K
Sbjct: 1   MSITTMPAFKFLTVA-ESCLLSQPSLFSSKTRYPILSNSLKTLK 43


>XP_013457715.1 31 kDa ribonucleoprotein [Medicago truncatula] KEH31746.1 31 kDa
           ribonucleoprotein [Medicago truncatula]
          Length = 300

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +1

Query: 139 MSITAMPAFKSLTMAAESCLLSQPSLFSTKTKHPFISNSLKPFK 270
           MSIT+   FKSLTMA ESCLLSQPSLF TK+K PFISNS KPFK
Sbjct: 1   MSITS---FKSLTMA-ESCLLSQPSLFYTKSKSPFISNSAKPFK 40


>AFK42498.1 unknown [Medicago truncatula]
          Length = 300

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +1

Query: 139 MSITAMPAFKSLTMAAESCLLSQPSLFSTKTKHPFISNSLKPFK 270
           MSIT+   FKSLTMA ESCLLSQPSLF TK+K PFISNS KPFK
Sbjct: 1   MSITS---FKSLTMA-ESCLLSQPSLFYTKSKSPFISNSAKPFK 40


>GAU50596.1 hypothetical protein TSUD_186680 [Trifolium subterraneum]
          Length = 301

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 34/44 (77%), Positives = 35/44 (79%)
 Frame = +1

Query: 139 MSITAMPAFKSLTMAAESCLLSQPSLFSTKTKHPFISNSLKPFK 270
           MSIT+   FKSLTMA ESCLLSQPSLF TKTK  FISNS K FK
Sbjct: 1   MSITS---FKSLTMA-ESCLLSQPSLFYTKTKSSFISNSSKSFK 40


>XP_004515855.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cicer
           arietinum]
          Length = 302

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +1

Query: 145 ITAMPAFKSLTMAAESCLLSQPSLFSTKTKHPFISNSL-KPFK 270
           ++ + +FKSLTMA ESC+LSQPSLF TKTK  FISNS+ KPFK
Sbjct: 1   MSIITSFKSLTMA-ESCILSQPSLFYTKTKSSFISNSVKKPFK 42


Top