BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00002945
         (304 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_061979527.1 MULTISPECIES: hypothetical protein [Bradyrhizobium]    166   4e-48
WP_043816183.1 MexE family multidrug efflux RND transporter peri...   104   2e-24
WP_026096428.1 MexE family multidrug efflux RND transporter peri...   102   2e-23
SFP43880.1 membrane fusion protein, multidrug efflux system [Var...   101   3e-23
WP_013541773.1 MexE family multidrug efflux RND transporter peri...   101   3e-23
WP_062479898.1 efflux transporter periplasmic adaptor subunit [V...   100   4e-23
WP_056581417.1 RND transporter MFP subunit [Variovorax sp. Root4...   100   4e-23
WP_042581471.1 MexE family multidrug efflux RND transporter peri...   100   5e-23
WP_051679409.1 RND transporter MFP subunit [Xanthobacter sp. 91]      100   7e-23
WP_043783622.1 MexE family multidrug efflux RND transporter peri...   100   1e-22
WP_051460995.1 RND transporter MFP subunit [Xanthobacter sp. 126]     100   1e-22
BAL93360.1 secretion protein HlyD family protein [Rubrivivax gel...   100   1e-22
KPF98552.1 RND transporter MFP subunit [Rhodopseudomonas sp. AAP...    99   1e-22
SEL84152.1 membrane fusion protein, multidrug efflux system [Ros...    99   3e-22
WP_063328087.1 efflux transporter periplasmic adaptor subunit [D...    99   3e-22
WP_016451231.1 MexE family multidrug efflux RND transporter peri...    99   3e-22
WP_016447674.1 MULTISPECIES: MexE family multidrug efflux RND tr...    99   3e-22
WP_012206936.1 MexE family multidrug efflux RND transporter peri...    99   3e-22
WP_074921009.1 efflux transporter periplasmic adaptor subunit [D...    98   4e-22
WP_051941114.1 MULTISPECIES: RND transporter MFP subunit [Delftia]     98   4e-22

>WP_061979527.1 MULTISPECIES: hypothetical protein [Bradyrhizobium]
          Length = 387

 Score =  166 bits (420), Expect = 4e-48
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADIR 235
           YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADIR
Sbjct: 178 YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADIR 237

Query: 236 GDRGHINTIPVSADIGGDAPPLQ 304
           GDRGHINTIPVSADIGGDAPPLQ
Sbjct: 238 GDRGHINTIPVSADIGGDAPPLQ 260


>WP_043816183.1 MexE family multidrug efflux RND transporter periplasmic adaptor
           subunit [Rubrivivax gelatinosus]
          Length = 392

 Score =  104 bits (259), Expect = 2e-24
 Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 3/86 (3%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALA--- 226
           YT+VRAP+SGR+G+RE+TVGNLV AGP AP+LTT++SVDPIYA F+ADE TV RALA   
Sbjct: 183 YTKVRAPVSGRVGKREVTVGNLVAAGPGAPVLTTLVSVDPIYASFDADEATVTRALATLP 242

Query: 227 DIRGDRGHINTIPVSADIGGDAPPLQ 304
           D  G RG I+ IPV   +GGD    Q
Sbjct: 243 DGPGKRGAIDRIPVR--MGGDGAERQ 266


>WP_026096428.1 MexE family multidrug efflux RND transporter periplasmic adaptor
           subunit [Ideonella sp. B508-1]
          Length = 409

 Score =  102 bits (253), Expect = 2e-23
 Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT VRAP+SGR+GRRE+TVGNLV AGP AP+LTT++SV PIYA F+ADE TVA+ALA + 
Sbjct: 183 YTVVRAPVSGRVGRREVTVGNLVAAGPGAPVLTTLVSVSPIYASFDADEATVAKALAGLP 242

Query: 233 --RGDRGHINTIPVSADIG-GDAPP 298
              G R  I+ IPV      GDA P
Sbjct: 243 GGAGQRARIDQIPVQMSTAEGDATP 267


>SFP43880.1 membrane fusion protein, multidrug efflux system [Variovorax sp.
           770b2]
          Length = 418

 Score =  101 bits (251), Expect = 3e-23
 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+ E+TVGNLV AGP AP+LTT++SV PIYA F+ADE+ V RAL D+ 
Sbjct: 189 YTQVRAPVSGRIGKLEVTVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVVTRALKDLP 248

Query: 233 --RGDRGHINTIPVSADIGG 286
              G RG I+TIPV     G
Sbjct: 249 ANAGARGQIDTIPVQMGTAG 268


>WP_013541773.1 MexE family multidrug efflux RND transporter periplasmic adaptor
           subunit [Variovorax paradoxus] ADU37546.1 efflux
           transporter, RND family, MFP subunit [Variovorax
           paradoxus EPS]
          Length = 418

 Score =  101 bits (251), Expect = 3e-23
 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+ E+TVGNLV AGP AP+LTT++SV PIYA F+ADE+ V RAL D+ 
Sbjct: 189 YTQVRAPVSGRIGKLEVTVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVVTRALKDLP 248

Query: 233 --RGDRGHINTIPVSADIGG 286
              G RG I+TIPV     G
Sbjct: 249 ANAGARGQIDTIPVQMGTAG 268


>WP_062479898.1 efflux transporter periplasmic adaptor subunit [Variovorax
           boronicumulans] OEZ29562.1 RND transporter MFP subunit
           [Variovorax boronicumulans]
          Length = 417

 Score =  100 bits (250), Expect = 4e-23
 Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+ E+TVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL D+ 
Sbjct: 189 YTQVRAPVSGRIGKLEVTVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKDLP 248

Query: 233 --RGDRGHINTIPVSADIGG 286
              G RG I+TIPV     G
Sbjct: 249 ANAGARGQIDTIPVQMGTAG 268


>WP_056581417.1 RND transporter MFP subunit [Variovorax sp. Root473] KQX87818.1 RND
           transporter MFP subunit [Variovorax sp. Root473]
          Length = 417

 Score =  100 bits (250), Expect = 4e-23
 Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+ E+TVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL D+ 
Sbjct: 189 YTQVRAPVSGRIGKLEVTVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKDLP 248

Query: 233 --RGDRGHINTIPVSADIGG 286
              G RG I+TIPV     G
Sbjct: 249 ANAGARGQIDTIPVQMGTAG 268


>WP_042581471.1 MexE family multidrug efflux RND transporter periplasmic adaptor
           subunit [Variovorax paradoxus] KIQ25047.1 RND
           transporter MFP subunit [Variovorax paradoxus]
          Length = 418

 Score =  100 bits (250), Expect = 5e-23
 Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+ E+TVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL D+ 
Sbjct: 189 YTQVRAPVSGRIGKLEVTVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKDLP 248

Query: 233 --RGDRGHINTIPVSADIGG 286
              G RG I+TIPV     G
Sbjct: 249 ANAGARGQIDTIPVQMGTAG 268


>WP_051679409.1 RND transporter MFP subunit [Xanthobacter sp. 91]
          Length = 393

 Score =  100 bits (248), Expect = 7e-23
 Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADIR 235
           YT+VRAP++GR+G+ EITVGNLV AGP AP+LTT++SVDPIYA F ADE TVARALA + 
Sbjct: 175 YTKVRAPVAGRVGKSEITVGNLVAAGPGAPVLTTLVSVDPIYASFSADEATVARALAGLG 234

Query: 236 GD---RGHINTIPVSADIGGDAPPLQ 304
           G       ++ IPV   +    PP++
Sbjct: 235 GGGDVADRLDQIPVLMTVAAGTPPVE 260


>WP_043783622.1 MexE family multidrug efflux RND transporter periplasmic adaptor
           subunit [Rubrivivax gelatinosus]
          Length = 392

 Score = 99.8 bits (247), Expect = 1e-22
 Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALA--- 226
           YT+VRAP+SGR+G+RE+TVGNLV AGP AP+LTT++SVDPIYA F+ADE TV RALA   
Sbjct: 183 YTKVRAPVSGRVGKREVTVGNLVAAGPGAPVLTTLVSVDPIYASFDADEATVTRALATLP 242

Query: 227 DIRGDRGHINTIPV 268
           D  G R  I+ IPV
Sbjct: 243 DGPGKRAAIDRIPV 256


>WP_051460995.1 RND transporter MFP subunit [Xanthobacter sp. 126]
          Length = 393

 Score = 99.8 bits (247), Expect = 1e-22
 Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADIR 235
           YT+VRAP++GR+G+ EITVGNLV AGP AP+LTT++SVDPIYA F ADE TVARALA + 
Sbjct: 175 YTKVRAPVAGRVGKSEITVGNLVAAGPGAPVLTTLVSVDPIYASFSADEATVARALAGLG 234

Query: 236 GD---RGHINTIPVSADIGGDAPPLQ 304
           G       ++ IPV   +    PP++
Sbjct: 235 GGGDVADRLDQIPVLMTLASGVPPVE 260


>BAL93360.1 secretion protein HlyD family protein [Rubrivivax gelatinosus
           IL144]
          Length = 397

 Score = 99.8 bits (247), Expect = 1e-22
 Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALA--- 226
           YT+VRAP+SGR+G+RE+TVGNLV AGP AP+LTT++SVDPIYA F+ADE TV RALA   
Sbjct: 188 YTKVRAPVSGRVGKREVTVGNLVAAGPGAPVLTTLVSVDPIYASFDADEATVTRALATLP 247

Query: 227 DIRGDRGHINTIPV 268
           D  G R  I+ IPV
Sbjct: 248 DGPGKRAAIDRIPV 261


>KPF98552.1 RND transporter MFP subunit [Rhodopseudomonas sp. AAP120]
          Length = 401

 Score = 99.4 bits (246), Expect = 1e-22
 Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADIR 235
           YTE+RAP+SGR+G+ EITVGNL+ AGPS+P+LTT++SV+PIYA F ADE+ VARAL  + 
Sbjct: 181 YTEIRAPVSGRVGKIEITVGNLIAAGPSSPLLTTLVSVNPIYASFNADEQVVARALKTLA 240

Query: 236 GDR--GHINTIPVSADIGGDAPPLQ 304
            ++  G I+ IPV    G D  P++
Sbjct: 241 DEKTPGAIDRIPVQMTTGTDTAPVK 265


>SEL84152.1 membrane fusion protein, multidrug efflux system [Roseateles sp.
           YR242]
          Length = 410

 Score = 98.6 bits (244), Expect = 3e-22
 Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADIR 235
           YT+VRAP++GR+GR E+T GNLV AGPSAP+LTT++SV PIYA F+ADERTVARALA++ 
Sbjct: 184 YTQVRAPVAGRVGRIEVTQGNLVAAGPSAPVLTTLVSVSPIYASFDADERTVARALAELP 243

Query: 236 GD---RGHINTIPV 268
           G    R  ++ IPV
Sbjct: 244 GGGGARSQLDRIPV 257


>WP_063328087.1 efflux transporter periplasmic adaptor subunit [Delftia sp.
           GW456-R20] KZK25326.1 efflux transporter periplasmic
           adaptor subunit [Delftia sp. GW456-R20]
          Length = 424

 Score = 98.6 bits (244), Expect = 3e-22
 Identities = 47/74 (63%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+REITVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL ++ 
Sbjct: 192 YTQVRAPVSGRIGKREITVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKELG 251

Query: 233 --RGDRGHINTIPV 268
              G+R  I++IPV
Sbjct: 252 GGAGNRARIDSIPV 265


>WP_016451231.1 MexE family multidrug efflux RND transporter periplasmic adaptor
           subunit [Delftia acidovorans] EPD46633.1 hypothetical
           protein HMPREF9702_00661 [Delftia acidovorans CCUG
           15835]
          Length = 427

 Score = 98.6 bits (244), Expect = 3e-22
 Identities = 47/74 (63%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+REITVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL ++ 
Sbjct: 195 YTQVRAPVSGRIGKREITVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKELG 254

Query: 233 --RGDRGHINTIPV 268
              G+R  I++IPV
Sbjct: 255 GGAGNRARIDSIPV 268


>WP_016447674.1 MULTISPECIES: MexE family multidrug efflux RND transporter
           periplasmic adaptor subunit [Delftia] EPD39495.1
           hypothetical protein HMPREF9701_02931 [Delftia
           acidovorans CCUG 274B] KLO59928.1 RND transporter MFP
           subunit [Delftia tsuruhatensis] AOV05187.1 efflux
           transporter periplasmic adaptor subunit [Delftia
           tsuruhatensis] SFA81873.1 membrane fusion protein,
           multidrug efflux system [Delftia tsuruhatensis]
          Length = 427

 Score = 98.6 bits (244), Expect = 3e-22
 Identities = 47/74 (63%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+REITVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL ++ 
Sbjct: 195 YTQVRAPVSGRIGKREITVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKELG 254

Query: 233 --RGDRGHINTIPV 268
              G+R  I++IPV
Sbjct: 255 GGAGNRARIDSIPV 268


>WP_012206936.1 MexE family multidrug efflux RND transporter periplasmic adaptor
           subunit [Delftia acidovorans] ABX37766.1 efflux
           transporter, RND family, MFP subunit [Delftia
           acidovorans SPH-1] OLE08527.1 efflux transporter
           periplasmic adaptor subunit [Delftia sp.
           13_1_20CM_4_67_18] OLE94338.1 efflux transporter
           periplasmic adaptor subunit [Delftia sp.
           13_1_40CM_3_66_6]
          Length = 427

 Score = 98.6 bits (244), Expect = 3e-22
 Identities = 47/74 (63%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+REITVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL ++ 
Sbjct: 195 YTQVRAPVSGRIGKREITVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKELG 254

Query: 233 --RGDRGHINTIPV 268
              G+R  I++IPV
Sbjct: 255 GGAGNRARIDSIPV 268


>WP_074921009.1 efflux transporter periplasmic adaptor subunit [Delftia lacustris]
           OJX26024.1 efflux transporter periplasmic adaptor
           subunit [Delftia sp. 67-8]
          Length = 404

 Score = 98.2 bits (243), Expect = 4e-22
 Identities = 47/74 (63%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+REITVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL ++ 
Sbjct: 172 YTQVRAPVSGRIGKREITVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKELG 231

Query: 233 --RGDRGHINTIPV 268
              G+R  I++IPV
Sbjct: 232 GGAGNRAKIDSIPV 245


>WP_051941114.1 MULTISPECIES: RND transporter MFP subunit [Delftia]
          Length = 404

 Score = 98.2 bits (243), Expect = 4e-22
 Identities = 47/74 (63%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
 Frame = +2

Query: 56  YTEVRAPISGRIGRREITVGNLVDAGPSAPILTTILSVDPIYAGFEADERTVARALADI- 232
           YT+VRAP+SGRIG+REITVGNLV AGP AP+LTT++SV PIYA F+ADE+ + RAL ++ 
Sbjct: 172 YTQVRAPVSGRIGKREITVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVITRALKELG 231

Query: 233 --RGDRGHINTIPV 268
              G+R  I++IPV
Sbjct: 232 GGAGNRAKIDSIPV 245