BLASTX nr result

ID: Glycyrrhiza28_contig00000546 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00000546
         (931 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU23189.1 hypothetical protein TSUD_172160 [Trifolium subterran...    59   1e-06
XP_014523858.1 PREDICTED: ABC transporter I family member 11, ch...    57   7e-06
XP_014523857.1 PREDICTED: ABC transporter I family member 11, ch...    57   9e-06
XP_014523852.1 PREDICTED: ABC transporter I family member 11, ch...    57   1e-05

>GAU23189.1 hypothetical protein TSUD_172160 [Trifolium subterraneum]
          Length = 191

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -2

Query: 795 LKVRDVSYQPPGTQLRLLNSVNFSLPEKR 709
           L+VRDVSYQPPGTQL+LLNSVNFSLPEKR
Sbjct: 35  LEVRDVSYQPPGTQLKLLNSVNFSLPEKR 63


>XP_014523858.1 PREDICTED: ABC transporter I family member 11, chloroplastic
           isoform X3 [Vigna radiata var. radiata]
          Length = 236

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 34/74 (45%), Positives = 41/74 (55%)
 Frame = -2

Query: 927 KFPIPTTPRLLRVHCGNSSIELRYSGN*RNVCTKKTVMFFFLLLLKVRDVSYQPPGTQLR 748
           KFP   T +L R+HC +SS E                         VR+VSYQPPGTQL+
Sbjct: 27  KFP---TTQLPRIHCSHSSFE-------------------------VREVSYQPPGTQLK 58

Query: 747 LLNSVNFSLPEKRY 706
           LLNSV+FSLPEK +
Sbjct: 59  LLNSVSFSLPEKSF 72


>XP_014523857.1 PREDICTED: ABC transporter I family member 11, chloroplastic
           isoform X2 [Vigna radiata var. radiata]
          Length = 270

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 34/74 (45%), Positives = 41/74 (55%)
 Frame = -2

Query: 927 KFPIPTTPRLLRVHCGNSSIELRYSGN*RNVCTKKTVMFFFLLLLKVRDVSYQPPGTQLR 748
           KFP   T +L R+HC +SS E                         VR+VSYQPPGTQL+
Sbjct: 27  KFP---TTQLPRIHCSHSSFE-------------------------VREVSYQPPGTQLK 58

Query: 747 LLNSVNFSLPEKRY 706
           LLNSV+FSLPEK +
Sbjct: 59  LLNSVSFSLPEKSF 72


>XP_014523852.1 PREDICTED: ABC transporter I family member 11, chloroplastic
           isoform X1 [Vigna radiata var. radiata] XP_014523853.1
           PREDICTED: ABC transporter I family member 11,
           chloroplastic isoform X1 [Vigna radiata var. radiata]
           XP_014523854.1 PREDICTED: ABC transporter I family
           member 11, chloroplastic isoform X1 [Vigna radiata var.
           radiata] XP_014523855.1 PREDICTED: ABC transporter I
           family member 11, chloroplastic isoform X1 [Vigna
           radiata var. radiata] XP_014523856.1 PREDICTED: ABC
           transporter I family member 11, chloroplastic isoform X1
           [Vigna radiata var. radiata]
          Length = 285

 Score = 57.0 bits (136), Expect = 1e-05
 Identities = 34/74 (45%), Positives = 41/74 (55%)
 Frame = -2

Query: 927 KFPIPTTPRLLRVHCGNSSIELRYSGN*RNVCTKKTVMFFFLLLLKVRDVSYQPPGTQLR 748
           KFP   T +L R+HC +SS E                         VR+VSYQPPGTQL+
Sbjct: 27  KFP---TTQLPRIHCSHSSFE-------------------------VREVSYQPPGTQLK 58

Query: 747 LLNSVNFSLPEKRY 706
           LLNSV+FSLPEK +
Sbjct: 59  LLNSVSFSLPEKSF 72


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