BLASTX nr result
ID: Glycyrrhiza28_contig00000206
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00000206
(402 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABN49455.1 photosystem I chlorophyll a/b binding protein, partia... 92 4e-21
ALX37541.1 chlorophyll a /b binding protein, partial [Beta nana] 91 1e-20
ALX37542.1 chlorophyll a /b binding protein, partial [Beta macro... 91 1e-20
ALX37543.1 chlorophyll a /b binding protein, partial [Beta lomat... 91 1e-20
ALX37556.1 chlorophyll a /b binding protein, partial [Beta vulga... 91 1e-20
ALX37547.1 chlorophyll a /b binding protein, partial [Beta vulga... 91 1e-20
ALX37544.1 chlorophyll a /b binding protein, partial [Beta vulga... 91 1e-20
ABX71549.1 chloroplast chlorophyll a/b binding protein, partial ... 90 2e-20
Q9SQL2.1 RecName: Full=Chlorophyll a-b binding protein P4, chlor... 92 5e-20
4Y28_4 Chain 4, The Structure Of Plant Photosystem I Super-compl... 92 5e-20
XP_010678492.1 PREDICTED: chlorophyll a-b binding protein 4, chl... 91 1e-19
XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, ch... 91 1e-19
XP_004138171.1 PREDICTED: chlorophyll a-b binding protein P4, ch... 91 1e-19
AFK37078.1 unknown [Lotus japonicus] 91 1e-19
AAP69815.1 chlorophyll a/b-binding protein, partial [Vitis vinif... 86 2e-19
XP_019437147.1 PREDICTED: chlorophyll a-b binding protein P4, ch... 90 2e-19
2WSC_4 Chain 4, Improved Model Of Plant Photosystem I 2WSE_4 Cha... 90 2e-19
OAY31051.1 hypothetical protein MANES_14G079800 [Manihot esculenta] 90 2e-19
XP_004513901.1 PREDICTED: chlorophyll a-b binding protein P4, ch... 90 2e-19
XP_006374459.1 hypothetical protein POPTR_0015s07340g [Populus t... 87 2e-19
>ABN49455.1 photosystem I chlorophyll a/b binding protein, partial
(chloroplast) [Pisum sativum]
Length = 144
Score = 91.7 bits (226), Expect = 4e-21
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFI+QHNVTGKGPFDNLLQH+SDPWHNTIVQTLGGN
Sbjct: 103 AMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 144
>ALX37541.1 chlorophyll a /b binding protein, partial [Beta nana]
Length = 148
Score = 90.9 bits (224), Expect = 1e-20
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTI+QT GGN
Sbjct: 107 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 148
>ALX37542.1 chlorophyll a /b binding protein, partial [Beta macrorhiza]
Length = 158
Score = 90.9 bits (224), Expect = 1e-20
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTI+QT GGN
Sbjct: 117 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 158
>ALX37543.1 chlorophyll a /b binding protein, partial [Beta lomatogona]
Length = 159
Score = 90.9 bits (224), Expect = 1e-20
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTI+QT GGN
Sbjct: 118 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 159
>ALX37556.1 chlorophyll a /b binding protein, partial [Beta vulgaris subsp.
maritima] ALX37558.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. maritima] ALX37594.1
chlorophyll a /b binding protein, partial [Beta
macrocarpa] ALX37595.1 chlorophyll a /b binding protein,
partial [Beta macrocarpa]
Length = 163
Score = 90.9 bits (224), Expect = 1e-20
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTI+QT GGN
Sbjct: 122 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 163
>ALX37547.1 chlorophyll a /b binding protein, partial [Beta vulgaris subsp.
maritima]
Length = 163
Score = 90.9 bits (224), Expect = 1e-20
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTI+QT GGN
Sbjct: 122 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 163
>ALX37544.1 chlorophyll a /b binding protein, partial [Beta vulgaris subsp.
maritima] ALX37545.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. maritima] ALX37546.1
chlorophyll a /b binding protein, partial [Beta vulgaris
subsp. maritima] ALX37548.1 chlorophyll a /b binding
protein, partial [Beta vulgaris subsp. maritima]
ALX37549.1 chlorophyll a /b binding protein, partial
[Beta vulgaris subsp. maritima] ALX37550.1 chlorophyll a
/b binding protein, partial [Beta vulgaris subsp.
maritima] ALX37551.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. maritima] ALX37552.1
chlorophyll a /b binding protein, partial [Beta vulgaris
subsp. maritima] ALX37553.1 chlorophyll a /b binding
protein, partial [Beta vulgaris subsp. maritima]
ALX37554.1 chlorophyll a /b binding protein, partial
[Beta vulgaris subsp. maritima] ALX37555.1 chlorophyll a
/b binding protein, partial [Beta vulgaris subsp.
maritima] ALX37557.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. maritima] ALX37559.1
chlorophyll a /b binding protein, partial [Beta vulgaris
subsp. maritima] ALX37560.1 chlorophyll a /b binding
protein, partial [Beta vulgaris subsp. maritima]
ALX37561.1 chlorophyll a /b binding protein, partial
[Beta vulgaris subsp. maritima] ALX37562.1 chlorophyll a
/b binding protein, partial [Beta vulgaris subsp.
maritima] ALX37563.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. maritima] ALX37564.1
chlorophyll a /b binding protein, partial [Beta vulgaris
subsp. maritima] ALX37565.1 chlorophyll a /b binding
protein, partial [Beta vulgaris subsp. maritima]
ALX37566.1 chlorophyll a /b binding protein, partial
[Beta vulgaris subsp. maritima] ALX37567.1 chlorophyll a
/b binding protein, partial [Beta vulgaris subsp.
maritima] ALX37568.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. maritima] ALX37569.1
chlorophyll a /b binding protein, partial [Beta vulgaris
subsp. maritima] ALX37570.1 chlorophyll a /b binding
protein, partial [Beta vulgaris subsp. maritima]
ALX37571.1 chlorophyll a /b binding protein, partial
[Beta vulgaris subsp. maritima] ALX37572.1 chlorophyll a
/b binding protein, partial [Beta vulgaris subsp.
maritima] ALX37573.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. maritima] ALX37574.1
chlorophyll a /b binding protein, partial [Beta vulgaris
subsp. maritima] ALX37575.1 chlorophyll a /b binding
protein, partial [Beta vulgaris subsp. maritima]
ALX37576.1 chlorophyll a /b binding protein, partial
[Beta vulgaris subsp. adanensis] ALX37577.1 chlorophyll
a /b binding protein, partial [Beta vulgaris subsp.
adanensis] ALX37578.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. adanensis] ALX37579.1
chlorophyll a /b binding protein, partial [Beta vulgaris
subsp. adanensis] ALX37580.1 chlorophyll a /b binding
protein, partial [Beta vulgaris subsp. adanensis]
ALX37581.1 chlorophyll a /b binding protein, partial
[Beta vulgaris subsp. adanensis] ALX37582.1 chlorophyll
a /b binding protein, partial [Beta vulgaris subsp.
adanensis] ALX37583.1 chlorophyll a /b binding protein,
partial [Beta vulgaris subsp. adanensis] ALX37584.1
chlorophyll a /b binding protein, partial [Beta vulgaris
subsp. adanensis] ALX37585.1 chlorophyll a /b binding
protein, partial [Beta vulgaris subsp. adanensis]
ALX37586.1 chlorophyll a /b binding protein, partial
[Beta vulgaris subsp. adanensis] ALX37587.1 chlorophyll
a /b binding protein, partial [Beta macrocarpa]
ALX37588.1 chlorophyll a /b binding protein, partial
[Beta macrocarpa] ALX37589.1 chlorophyll a /b binding
protein, partial [Beta macrocarpa] ALX37590.1
chlorophyll a /b binding protein, partial [Beta
macrocarpa] ALX37591.1 chlorophyll a /b binding protein,
partial [Beta macrocarpa] ALX37592.1 chlorophyll a /b
binding protein, partial [Beta macrocarpa] ALX37593.1
chlorophyll a /b binding protein, partial [Beta
macrocarpa] ALX37596.1 chlorophyll a /b binding protein,
partial [Beta macrocarpa] ALX37597.1 chlorophyll a /b
binding protein, partial [Beta macrocarpa]
Length = 163
Score = 90.9 bits (224), Expect = 1e-20
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTI+QT GGN
Sbjct: 122 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 163
>ABX71549.1 chloroplast chlorophyll a/b binding protein, partial [Helianthus
annuus] ABX71550.1 chloroplast chlorophyll a/b binding
protein, partial [Helianthus annuus] ABX71551.1
chloroplast chlorophyll a/b binding protein, partial
[Helianthus annuus] ABX71552.1 chloroplast chlorophyll
a/b binding protein, partial [Helianthus annuus]
ABX71553.1 chloroplast chlorophyll a/b binding protein,
partial [Helianthus annuus] ABX71554.1 chloroplast
chlorophyll a/b binding protein, partial [Helianthus
annuus] ABX71555.1 chloroplast chlorophyll a/b binding
protein, partial [Helianthus annuus] ABX71556.1
chloroplast chlorophyll a/b binding protein, partial
[Helianthus annuus] ABX71557.1 chloroplast chlorophyll
a/b binding protein, partial [Helianthus annuus]
ABX71558.1 chloroplast chlorophyll a/b binding protein,
partial [Helianthus annuus] ABX71559.1 chloroplast
chlorophyll a/b binding protein, partial [Helianthus
annuus] ABX71560.1 chloroplast chlorophyll a/b binding
protein, partial [Helianthus annuus] ABX71561.1
chloroplast chlorophyll a/b binding protein, partial
[Helianthus annuus] ABX71562.1 chloroplast chlorophyll
a/b binding protein, partial [Helianthus annuus]
ABX71563.1 chloroplast chlorophyll a/b binding protein,
partial [Helianthus annuus] ABX71564.1 chloroplast
chlorophyll a/b binding protein, partial [Helianthus
annuus] ABX71565.1 chloroplast chlorophyll a/b binding
protein, partial [Helianthus annuus] ABX71566.1
chloroplast chlorophyll a/b binding protein, partial
[Helianthus annuus] ABX71567.1 chloroplast chlorophyll
a/b binding protein, partial [Helianthus annuus]
Length = 135
Score = 89.7 bits (221), Expect = 2e-20
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQT+ GN
Sbjct: 94 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTMSGN 135
>Q9SQL2.1 RecName: Full=Chlorophyll a-b binding protein P4, chloroplastic;
AltName: Full=LHCI type III CAB-P4; Flags: Precursor
AAF13731.1 PSI light-harvesting antenna chlorophyll
a/b-binding protein [Pisum sativum]
Length = 252
Score = 91.7 bits (226), Expect = 5e-20
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFI+QHNVTGKGPFDNLLQH+SDPWHNTIVQTLGGN
Sbjct: 211 AMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
>4Y28_4 Chain 4, The Structure Of Plant Photosystem I Super-complex At 2.8
Angstrom Resolution.
Length = 252
Score = 91.7 bits (226), Expect = 5e-20
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFI+QHNVTGKGPFDNLLQH+SDPWHNTIVQTLGGN
Sbjct: 211 AMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
>XP_010678492.1 PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Beta
vulgaris subsp. vulgaris] CAE30280.1 chlorophyll a /b
binding protein [Beta vulgaris] KMT10798.1 hypothetical
protein BVRB_5g114540 [Beta vulgaris subsp. vulgaris]
Length = 252
Score = 90.9 bits (224), Expect = 1e-19
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTI+QT GGN
Sbjct: 211 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTFGGN 252
>XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic
[Cucumis melo]
Length = 252
Score = 90.5 bits (223), Expect = 1e-19
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQH+SDPWHNTIVQT GGN
Sbjct: 211 AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN 252
>XP_004138171.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic
[Cucumis sativus] KGN63677.1 hypothetical protein
Csa_1G009810 [Cucumis sativus]
Length = 252
Score = 90.5 bits (223), Expect = 1e-19
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQH+SDPWHNTIVQT GGN
Sbjct: 211 AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN 252
>AFK37078.1 unknown [Lotus japonicus]
Length = 252
Score = 90.5 bits (223), Expect = 1e-19
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTL GN
Sbjct: 211 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLSGN 252
>AAP69815.1 chlorophyll a/b-binding protein, partial [Vitis vinifera]
Length = 96
Score = 86.3 bits (212), Expect = 2e-19
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGG 278
AMLAFLGFIVQHNVTGKGPFDNLLQH+SDPWHNTI+QTL G
Sbjct: 55 AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTLRG 95
>XP_019437147.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Lupinus angustifolius] OIW15420.1 hypothetical protein
TanjilG_32659 [Lupinus angustifolius]
Length = 251
Score = 90.1 bits (222), Expect = 2e-19
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFI+QHNVTGKGPFDNLLQHLS PWHNTIVQTLGGN
Sbjct: 210 AMLAFLGFIIQHNVTGKGPFDNLLQHLSSPWHNTIVQTLGGN 251
>2WSC_4 Chain 4, Improved Model Of Plant Photosystem I 2WSE_4 Chain 4,
Improved Model Of Plant Photosystem I 2WSF_4 Chain 4,
Improved Model Of Plant Photosystem I
Length = 251
Score = 90.1 bits (222), Expect = 2e-19
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -3
Query: 397 MLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
MLAFLGFI+QHNVTGKGPFDNLLQH+SDPWHNTIVQTLGGN
Sbjct: 211 MLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 251
>OAY31051.1 hypothetical protein MANES_14G079800 [Manihot esculenta]
Length = 252
Score = 90.1 bits (222), Expect = 2e-19
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGF+VQHNVTGKGPFDNLLQHLSDPWHNTIVQTL GN
Sbjct: 211 AMLAFLGFVVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLSGN 252
>XP_004513901.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cicer
arietinum]
Length = 252
Score = 90.1 bits (222), Expect = 2e-19
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTI+QTL GN
Sbjct: 211 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTLSGN 252
>XP_006374459.1 hypothetical protein POPTR_0015s07340g [Populus trichocarpa]
XP_006374460.1 hypothetical protein POPTR_0015s07340g
[Populus trichocarpa] ERP52256.1 hypothetical protein
POPTR_0015s07340g [Populus trichocarpa] ERP52257.1
hypothetical protein POPTR_0015s07340g [Populus
trichocarpa]
Length = 150
Score = 87.4 bits (215), Expect = 2e-19
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -3
Query: 400 AMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN 275
AMLAFLGF++QHNVTGKGPFDNLLQH+SDPWHNTIVQT GN
Sbjct: 109 AMLAFLGFVIQHNVTGKGPFDNLLQHISDPWHNTIVQTFSGN 150