BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032738
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]     161   4e-38
ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]     155   4e-36
ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...   119   3e-25
emb|CBI29966.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Ar...   103   2e-20

>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score =  161 bits (408), Expect = 4e-38
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = +3

Query: 3    RVHITEVHDANVLENPFSSYKIGQTVTARIVMKPNEGDSNRSGSRWELSVRPEMVTGSSD 182
            R+HITEV+  NVLENPFSSYK+GQTVTARIV KPNE D NR GS+WELSVRPEMVTGSSD
Sbjct: 1057 RIHITEVYYGNVLENPFSSYKVGQTVTARIVAKPNESDGNRKGSQWELSVRPEMVTGSSD 1116

Query: 183  VGDHVSENHDFKIGQCVTGYVYKVESEWVWLTIS 284
            + D VSEN +FKIGQCV GYVYKVESEWVWLTIS
Sbjct: 1117 I-DDVSENLEFKIGQCVAGYVYKVESEWVWLTIS 1149


>ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 2174

 Score =  155 bits (391), Expect = 4e-36
 Identities = 74/94 (78%), Positives = 82/94 (87%)
 Frame = +3

Query: 3    RVHITEVHDANVLENPFSSYKIGQTVTARIVMKPNEGDSNRSGSRWELSVRPEMVTGSSD 182
            R+HITEV + +VLENPFS YK+GQTVTARIV KPNE D NR GS+WELSVR EMVTGSSD
Sbjct: 1194 RIHITEVQNGSVLENPFSCYKVGQTVTARIVAKPNESDGNRKGSQWELSVRSEMVTGSSD 1253

Query: 183  VGDHVSENHDFKIGQCVTGYVYKVESEWVWLTIS 284
            + D VSEN +FKIGQCV GYVYKVESEW+WLTIS
Sbjct: 1254 I-DDVSENLEFKIGQCVAGYVYKVESEWIWLTIS 1286


>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/96 (60%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3    RVHITEVHDANVLENPFSSYKIGQTVTARIVMKPNEGDSNRSGSRWELSVRPEMVTGSSD 182
            RVHITEV D NV+ENPFS+++IGQTV+ARIV K N+ ++N    +WELS++PEM+TGS +
Sbjct: 1058 RVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIE 1117

Query: 183  VGDHVSENHDFKI--GQCVTGYVYKVESEWVWLTIS 284
            V + + +  +F+I  GQ VTGYVYKVE+EW+WLTIS
Sbjct: 1118 VENKLVD-AEFRISTGQRVTGYVYKVENEWIWLTIS 1152


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/96 (60%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3    RVHITEVHDANVLENPFSSYKIGQTVTARIVMKPNEGDSNRSGSRWELSVRPEMVTGSSD 182
            RVHITEV D NV+ENPFS+++IGQTV+ARIV K N+ ++N    +WELS++PEM+TGS +
Sbjct: 1064 RVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIE 1123

Query: 183  VGDHVSENHDFKI--GQCVTGYVYKVESEWVWLTIS 284
            V + + +  +F+I  GQ VTGYVYKVE+EW+WLTIS
Sbjct: 1124 VENKLVD-AEFRISTGQRVTGYVYKVENEWIWLTIS 1158


>ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297330716|gb|EFH61135.1| S1 RNA-binding
            domain-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1843

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3    RVHITEVHDANVLENPFSSYKIGQTVTARIVMKPNEGDSNRSGSRWELSVRPEMVTGSSD 182
            R+HITEV+DA+  + PF+ +++GQ+++AR+V KP   D  +S   WELSV+P M+  SS+
Sbjct: 996  RIHITEVNDASTSDEPFAKFRVGQSMSARVVSKPCHTDIKKS-QLWELSVKPAMLRDSSE 1054

Query: 183  VGD-HVSENHDFKIGQCVTGYVYKVESEWVWLTIS 284
            + D   SE  +F  GQCV GYVYKV+ EWVWL IS
Sbjct: 1055 LNDIQESEQLEFVAGQCVNGYVYKVDKEWVWLAIS 1089