BLASTX nr result

ID: Glycyrrhiza24_contig00032724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032724
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|NP_177599.1| pentatricopeptide repeat-containing protein [Ar...   175   3e-42
gb|ACU28027.1| At1g74600-like protein [Arabidopsis thaliana] gi|...   175   3e-42
gb|ACU28020.1| At1g74600-like protein [Arabidopsis thaliana] gi|...   175   3e-42
gb|ACU28014.1| At1g74600-like protein [Arabidopsis thaliana] gi|...   175   3e-42

>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
            chloroplastic [Vitis vinifera]
            gi|297733984|emb|CBI15231.3| unnamed protein product
            [Vitis vinifera]
          Length = 893

 Score =  179 bits (454), Expect = 2e-43
 Identities = 82/116 (70%), Positives = 100/116 (86%)
 Frame = +3

Query: 3    ADALAAYELMRKEGVRPDAVTFVGILLACSHSGLVEEAFFYLNSMIKDCNITPSHRHYAC 182
            A+AL  Y+LMRKEG +PD+VTFVG+L ACSH+G+VEE + +LNSM K+  I P + HYAC
Sbjct: 733  AEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYAC 792

Query: 183  IVDLLGRSGRLREAESFINNMPFEPDALIWGTLLSACKVHGDFELGKLAAKKVLEL 350
            +VDLLGRSGRL+EAE FINNMP EPDAL+WG LL+ACKVHGD ELG+LAAK+V+EL
Sbjct: 793  MVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIEL 848


>ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g74600, chloroplastic; Flags: Precursor
            gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical
            protein; 84160-81473 [Arabidopsis thaliana]
            gi|332197493|gb|AEE35614.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  175 bits (444), Expect = 3e-42
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +3

Query: 6    DALAAYELMRKEGVRPDAVTFVGILLACSHSGLVEEAFFYLNSMIKDCNITPSHRHYACI 185
            +AL  Y LM+++G +PD VTFVG+L ACSH GLVEE++F+LNSM+KD  I P +RHY C+
Sbjct: 736  EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 795

Query: 186  VDLLGRSGRLREAESFINNMPFEPDALIWGTLLSACKVHGDFELGKLAAKKVLEL 350
            VD LGRSGRLREAESFINNM  +PDAL+WGTLL+ACK+HG+ ELGK+AAKK +EL
Sbjct: 796  VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIEL 850


>gb|ACU28027.1| At1g74600-like protein [Arabidopsis thaliana]
           gi|255685124|gb|ACU28051.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685126|gb|ACU28052.1|
           At1g74600-like protein [Arabidopsis thaliana]
          Length = 182

 Score =  175 bits (444), Expect = 3e-42
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +3

Query: 6   DALAAYELMRKEGVRPDAVTFVGILLACSHSGLVEEAFFYLNSMIKDCNITPSHRHYACI 185
           +AL  Y LM+++G +PD VTFVG+L ACSH GLVEE++F+LNSM+KD  I P +RHY C+
Sbjct: 48  EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 107

Query: 186 VDLLGRSGRLREAESFINNMPFEPDALIWGTLLSACKVHGDFELGKLAAKKVLEL 350
           VD LGRSGRLREAESFINNM  +PDAL+WGTLL+ACK+HG+ ELGK+AAKK +EL
Sbjct: 108 VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIEL 162


>gb|ACU28020.1| At1g74600-like protein [Arabidopsis thaliana]
           gi|255685116|gb|ACU28047.1| At1g74600-like protein
           [Arabidopsis thaliana]
          Length = 182

 Score =  175 bits (444), Expect = 3e-42
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +3

Query: 6   DALAAYELMRKEGVRPDAVTFVGILLACSHSGLVEEAFFYLNSMIKDCNITPSHRHYACI 185
           +AL  Y LM+++G +PD VTFVG+L ACSH GLVEE++F+LNSM+KD  I P +RHY C+
Sbjct: 48  EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 107

Query: 186 VDLLGRSGRLREAESFINNMPFEPDALIWGTLLSACKVHGDFELGKLAAKKVLEL 350
           VD LGRSGRLREAESFINNM  +PDAL+WGTLL+ACK+HG+ ELGK+AAKK +EL
Sbjct: 108 VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIEL 162


>gb|ACU28014.1| At1g74600-like protein [Arabidopsis thaliana]
           gi|255685052|gb|ACU28015.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685054|gb|ACU28016.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685056|gb|ACU28017.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685058|gb|ACU28018.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685060|gb|ACU28019.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685064|gb|ACU28021.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685066|gb|ACU28022.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685068|gb|ACU28023.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685070|gb|ACU28024.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685072|gb|ACU28025.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685074|gb|ACU28026.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685078|gb|ACU28028.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685080|gb|ACU28029.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685082|gb|ACU28030.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685086|gb|ACU28032.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685088|gb|ACU28033.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685090|gb|ACU28034.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685092|gb|ACU28035.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685096|gb|ACU28037.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685098|gb|ACU28038.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685100|gb|ACU28039.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685102|gb|ACU28040.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685104|gb|ACU28041.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685106|gb|ACU28042.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685108|gb|ACU28043.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685110|gb|ACU28044.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685112|gb|ACU28045.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685114|gb|ACU28046.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685118|gb|ACU28048.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685120|gb|ACU28049.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685122|gb|ACU28050.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685128|gb|ACU28053.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685130|gb|ACU28054.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685132|gb|ACU28055.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685134|gb|ACU28056.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685136|gb|ACU28057.1|
           At1g74600-like protein [Arabidopsis thaliana]
           gi|255685138|gb|ACU28058.1| At1g74600-like protein
           [Arabidopsis thaliana] gi|255685140|gb|ACU28059.1|
           At1g74600-like protein [Arabidopsis thaliana]
          Length = 182

 Score =  175 bits (444), Expect = 3e-42
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +3

Query: 6   DALAAYELMRKEGVRPDAVTFVGILLACSHSGLVEEAFFYLNSMIKDCNITPSHRHYACI 185
           +AL  Y LM+++G +PD VTFVG+L ACSH GLVEE++F+LNSM+KD  I P +RHY C+
Sbjct: 48  EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 107

Query: 186 VDLLGRSGRLREAESFINNMPFEPDALIWGTLLSACKVHGDFELGKLAAKKVLEL 350
           VD LGRSGRLREAESFINNM  +PDAL+WGTLL+ACK+HG+ ELGK+AAKK +EL
Sbjct: 108 VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIEL 162


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