BLASTX nr result
ID: Glycyrrhiza24_contig00032722
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032722 (211 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi... 131 5e-29 ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ... 127 1e-27 gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula] 127 1e-27 ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi... 124 6e-27 emb|CBI15551.3| unnamed protein product [Vitis vinifera] 124 8e-27 >ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Glycine max] Length = 763 Score = 131 bits (330), Expect = 5e-29 Identities = 64/68 (94%), Positives = 65/68 (95%) Frame = -3 Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27 LEELDLKMRREGYV STKLVLHDVEEEEKE MLKYHSEKLAVAFGILTIPA RPIRVMKN Sbjct: 660 LEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKN 719 Query: 26 LRVCEDCH 3 LRVC+DCH Sbjct: 720 LRVCQDCH 727 >ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 980 Score = 127 bits (318), Expect = 1e-27 Identities = 62/68 (91%), Positives = 62/68 (91%) Frame = -3 Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27 LEELDLKMR EGYV TKLVLHDVEEEEKE MLKYHSEKLAVAFGILTIP RPIRVMKN Sbjct: 663 LEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKN 722 Query: 26 LRVCEDCH 3 LRVCEDCH Sbjct: 723 LRVCEDCH 730 Score = 65.9 bits (159), Expect = 3e-09 Identities = 40/68 (58%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Frame = -3 Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVM-K 30 LEELDLKMR EEEKER LKY SE LA A GILTIP RP RVM K Sbjct: 893 LEELDLKMRER--------------EEEKERTLKYLSENLAAALGILTIPVGRPNRVMKK 938 Query: 29 NLRVCEDC 6 + VCEDC Sbjct: 939 RVYVCEDC 946 >gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula] Length = 766 Score = 127 bits (318), Expect = 1e-27 Identities = 62/68 (91%), Positives = 62/68 (91%) Frame = -3 Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27 LEELDLKMR EGYV TKLVLHDVEEEEKE MLKYHSEKLAVAFGILTIP RPIRVMKN Sbjct: 663 LEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKN 722 Query: 26 LRVCEDCH 3 LRVCEDCH Sbjct: 723 LRVCEDCH 730 >ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Glycine max] Length = 750 Score = 124 bits (312), Expect = 6e-27 Identities = 59/68 (86%), Positives = 64/68 (94%) Frame = -3 Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27 LEELDLKM+ EGYV STKLVLHDVEEEEK+ MLKYHSEKLAVAFGILT+P+ +PIRVMKN Sbjct: 647 LEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKN 706 Query: 26 LRVCEDCH 3 LRVCEDCH Sbjct: 707 LRVCEDCH 714 >emb|CBI15551.3| unnamed protein product [Vitis vinifera] Length = 685 Score = 124 bits (311), Expect = 8e-27 Identities = 60/68 (88%), Positives = 63/68 (92%) Frame = -3 Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27 LEELDLKM++EGYV STKLVLHDVEEEEK MLKYHSEKLAVAFGIL IPA RPIRV+KN Sbjct: 582 LEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKN 641 Query: 26 LRVCEDCH 3 LRVCEDCH Sbjct: 642 LRVCEDCH 649