BLASTX nr result

ID: Glycyrrhiza24_contig00032722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032722
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...   127   1e-27
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]   127   1e-27
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
emb|CBI15551.3| unnamed protein product [Vitis vinifera]              124   8e-27

>ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/68 (94%), Positives = 65/68 (95%)
 Frame = -3

Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27
           LEELDLKMRREGYV STKLVLHDVEEEEKE MLKYHSEKLAVAFGILTIPA RPIRVMKN
Sbjct: 660 LEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKN 719

Query: 26  LRVCEDCH 3
           LRVC+DCH
Sbjct: 720 LRVCQDCH 727


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525106|gb|AET05560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/68 (91%), Positives = 62/68 (91%)
 Frame = -3

Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27
           LEELDLKMR EGYV  TKLVLHDVEEEEKE MLKYHSEKLAVAFGILTIP  RPIRVMKN
Sbjct: 663 LEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKN 722

Query: 26  LRVCEDCH 3
           LRVCEDCH
Sbjct: 723 LRVCEDCH 730



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/68 (58%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -3

Query: 206  LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVM-K 30
            LEELDLKMR                EEEKER LKY SE LA A GILTIP  RP RVM K
Sbjct: 893  LEELDLKMRER--------------EEEKERTLKYLSENLAAALGILTIPVGRPNRVMKK 938

Query: 29   NLRVCEDC 6
             + VCEDC
Sbjct: 939  RVYVCEDC 946


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/68 (91%), Positives = 62/68 (91%)
 Frame = -3

Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27
           LEELDLKMR EGYV  TKLVLHDVEEEEKE MLKYHSEKLAVAFGILTIP  RPIRVMKN
Sbjct: 663 LEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKN 722

Query: 26  LRVCEDCH 3
           LRVCEDCH
Sbjct: 723 LRVCEDCH 730


>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = -3

Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27
           LEELDLKM+ EGYV STKLVLHDVEEEEK+ MLKYHSEKLAVAFGILT+P+ +PIRVMKN
Sbjct: 647 LEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKN 706

Query: 26  LRVCEDCH 3
           LRVCEDCH
Sbjct: 707 LRVCEDCH 714


>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/68 (88%), Positives = 63/68 (92%)
 Frame = -3

Query: 206 LEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKYHSEKLAVAFGILTIPAARPIRVMKN 27
           LEELDLKM++EGYV STKLVLHDVEEEEK  MLKYHSEKLAVAFGIL IPA RPIRV+KN
Sbjct: 582 LEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKN 641

Query: 26  LRVCEDCH 3
           LRVCEDCH
Sbjct: 642 LRVCEDCH 649


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