BLASTX nr result

ID: Glycyrrhiza24_contig00032720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032720
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536838.1| PREDICTED: uncharacterized protein LOC100810...   154   1e-35
ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266...   114   8e-24
emb|CBI23686.3| unnamed protein product [Vitis vinifera]              114   8e-24
emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]   114   8e-24
ref|XP_002528813.1| splicing factor u2af large subunit, putative...   106   2e-21

>ref|XP_003536838.1| PREDICTED: uncharacterized protein LOC100810537 [Glycine max]
          Length = 735

 Score =  154 bits (388), Expect = 1e-35
 Identities = 75/95 (78%), Positives = 83/95 (87%)
 Frame = -3

Query: 285 SMHDVALATSLDPAIKKPLPVSFLNEVSTGKNANIDSVQLTQATRPMRRLYLENLPASAS 106
           +MHDV   +SLD A+ KPLPVSF ++VSTGKN NIDSVQLTQATRP+RRLYLENLPASAS
Sbjct: 237 NMHDVVSTSSLDLALVKPLPVSFPSDVSTGKNTNIDSVQLTQATRPIRRLYLENLPASAS 296

Query: 105 EKAVMDCFNNLLLSTGVNHSQQAHPCISCIMHKDR 1
           EKAVMDCFNNLLLS  VNH QQA PCI CI+HKD+
Sbjct: 297 EKAVMDCFNNLLLSARVNHIQQAQPCICCILHKDK 331


>ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
          Length = 895

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/80 (65%), Positives = 65/80 (81%)
 Frame = -3

Query: 240 KKPLPVSFLNEVSTGKNANIDSVQLTQATRPMRRLYLENLPASASEKAVMDCFNNLLLST 61
           K PLP  + + VS  KN +IDS+QLTQATRPMRRLY+ENLP S+SEKA+M+C NN LLS+
Sbjct: 408 KPPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSS 467

Query: 60  GVNHSQQAHPCISCIMHKDR 1
           G+NH Q   PCISCI+HK++
Sbjct: 468 GINHVQGTPPCISCIIHKEK 487


>emb|CBI23686.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/80 (65%), Positives = 65/80 (81%)
 Frame = -3

Query: 240 KKPLPVSFLNEVSTGKNANIDSVQLTQATRPMRRLYLENLPASASEKAVMDCFNNLLLST 61
           K PLP  + + VS  KN +IDS+QLTQATRPMRRLY+ENLP S+SEKA+M+C NN LLS+
Sbjct: 371 KPPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSS 430

Query: 60  GVNHSQQAHPCISCIMHKDR 1
           G+NH Q   PCISCI+HK++
Sbjct: 431 GINHVQGTPPCISCIIHKEK 450


>emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]
          Length = 544

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/80 (65%), Positives = 65/80 (81%)
 Frame = -3

Query: 240 KKPLPVSFLNEVSTGKNANIDSVQLTQATRPMRRLYLENLPASASEKAVMDCFNNLLLST 61
           K PLP  + + VS  KN +IDS+QLTQATRPMRRLY+ENLP S+SEKA+M+C NN LLS+
Sbjct: 408 KPPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSS 467

Query: 60  GVNHSQQAHPCISCIMHKDR 1
           G+NH Q   PCISCI+HK++
Sbjct: 468 GINHVQGTPPCISCIIHKEK 487


>ref|XP_002528813.1| splicing factor u2af large subunit, putative [Ricinus communis]
           gi|223531725|gb|EEF33547.1| splicing factor u2af large
           subunit, putative [Ricinus communis]
          Length = 844

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -3

Query: 237 KPLPVSFLNEVSTGKNANIDSVQLTQATRPMRRLYLENLPASASEKAVMDCFNNLLLSTG 58
           KPL     N + T KN  IDSVQLTQATRPMRRLY+EN+PA ASEKAV++  NNLL+S+G
Sbjct: 372 KPLSGVSSNILLTNKNDTIDSVQLTQATRPMRRLYVENIPAEASEKAVLERLNNLLISSG 431

Query: 57  VNHSQQAHPCISCIMHKDR 1
           VNH Q   PCISCI+HK++
Sbjct: 432 VNHIQGTQPCISCIIHKEK 450


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