BLASTX nr result

ID: Glycyrrhiza24_contig00032716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032716
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625773.1| ABC transporter G family member [Medicago tr...    96   3e-18
ref|XP_003625775.1| Pleiotropic drug resistance ABC transporter ...    94   2e-17
ref|XP_002326416.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
emb|CBI30263.3| unnamed protein product [Vitis vinifera]               74   2e-11
emb|CAN77838.1| hypothetical protein VITISV_025837 [Vitis vinifera]    74   2e-11

>ref|XP_003625773.1| ABC transporter G family member [Medicago truncatula]
           gi|355500788|gb|AES81991.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 1455

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 51/84 (60%), Positives = 56/84 (66%)
 Frame = -2

Query: 252 TVGKVLLKSRGLYTEDYWYWICIXXXXXXXXXXXXXXXXXLTYLTPLGDSKAVTADEGDK 73
           TVGKVLLK+RGLYTE+YWYWICI                 LTYL PL DSKAVT DE D 
Sbjct: 745 TVGKVLLKARGLYTEEYWYWICIGALIGFSLLFNLLFLLALTYLNPLADSKAVTVDE-DD 803

Query: 72  KNENSSSRHDILEGTSIAVKKSSE 1
           KN N SSRH  LEGT++ V+ SSE
Sbjct: 804 KNGNPSSRHHPLEGTNMEVRNSSE 827


>ref|XP_003625775.1| Pleiotropic drug resistance ABC transporter family protein [Medicago
            truncatula] gi|355500790|gb|AES81993.1| Pleiotropic drug
            resistance ABC transporter family protein [Medicago
            truncatula]
          Length = 1461

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/84 (57%), Positives = 53/84 (63%)
 Frame = -2

Query: 252  TVGKVLLKSRGLYTEDYWYWICIXXXXXXXXXXXXXXXXXLTYLTPLGDSKAVTADEGDK 73
            TVGKVLLK+RGLY EDYWYWICI                 LTYL PLGDSKAV  DE D+
Sbjct: 751  TVGKVLLKARGLYAEDYWYWICIGALVGFSLLFNFLFVLALTYLNPLGDSKAVAVDEDDE 810

Query: 72   KNENSSSRHDILEGTSIAVKKSSE 1
            KN + SSRH  LE T + V+ S E
Sbjct: 811  KNGSPSSRHHPLEDTGMEVRNSLE 834


>ref|XP_002326416.1| predicted protein [Populus trichocarpa] gi|222833609|gb|EEE72086.1|
            predicted protein [Populus trichocarpa]
          Length = 1463

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/84 (47%), Positives = 51/84 (60%)
 Frame = -2

Query: 252  TVGKVLLKSRGLYTEDYWYWICIXXXXXXXXXXXXXXXXXLTYLTPLGDSKAVTADEGDK 73
            TVGKVLLK+RG +T+DYW+WICI                 LT+L PLGDSKAV  D+  K
Sbjct: 756  TVGKVLLKARGFFTDDYWFWICIGALFGFSLLFNVLFIVALTFLNPLGDSKAVVVDDDAK 815

Query: 72   KNENSSSRHDILEGTSIAVKKSSE 1
            KN+ +SS     EG  +A + S+E
Sbjct: 816  KNKKTSSGQQRAEGIPMATRNSTE 839


>emb|CBI30263.3| unnamed protein product [Vitis vinifera]
          Length = 1357

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = -2

Query: 252 TVGKVLLKSRGLYTEDYWYWICIXXXXXXXXXXXXXXXXXLTYLTPLGDSKAVTADEGDK 73
           TVGKVLLKSRG + ++YW+WIC+                 LT+L PLGD+K    +E D 
Sbjct: 650 TVGKVLLKSRGFFVDEYWFWICVVALLAFSLLFNVLFVAALTFLNPLGDTKNAILNEEDD 709

Query: 72  KNEN-SSSRHDILEGTSIAVKKSSE 1
           KN+N +SS     EGT +AV  SSE
Sbjct: 710 KNKNKASSGQHSTEGTDMAVINSSE 734


>emb|CAN77838.1| hypothetical protein VITISV_025837 [Vitis vinifera]
          Length = 1456

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = -2

Query: 252  TVGKVLLKSRGLYTEDYWYWICIXXXXXXXXXXXXXXXXXLTYLTPLGDSKAVTADEGDK 73
            TVGKVLLKSRG + ++YW+WIC+                 LT+L PLGD+K    +E D 
Sbjct: 749  TVGKVLLKSRGFFVDEYWFWICVXALLAFSLLFNVLFVAALTFLNPLGDTKNAILNEEDD 808

Query: 72   KNEN-SSSRHDILEGTSIAVKKSSE 1
            KN+N +SS     EGT +AV  SSE
Sbjct: 809  KNKNKASSGQHSTEGTDMAVINSSE 833


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