BLASTX nr result
ID: Glycyrrhiza24_contig00032712
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032712 (281 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat... 129 3e-28 emb|CBI30347.3| unnamed protein product [Vitis vinifera] 111 5e-23 ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat... 111 5e-23 emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera] 111 5e-23 ref|XP_002530515.1| pentatricopeptide repeat-containing protein,... 110 2e-22 >ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570-like [Glycine max] Length = 566 Score = 129 bits (323), Expect = 3e-28 Identities = 63/93 (67%), Positives = 74/93 (79%) Frame = +2 Query: 2 KSVHGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXX 181 KS+HGSA RCGV+ D +VGTSLIDMYGKCGEI DARK+FD MS+ RNVVSWTAM Sbjct: 148 KSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSD-RNVVSWTAMLVGYVA 206 Query: 182 XXXXXEAKKVFDVMPKRNVASWNAILRGFVKVG 280 EA+K+FD MP RNVASWN++L+GFVK+G Sbjct: 207 VGDVVEARKLFDEMPHRNVASWNSMLQGFVKMG 239 >emb|CBI30347.3| unnamed protein product [Vitis vinifera] Length = 560 Score = 111 bits (278), Expect = 5e-23 Identities = 56/90 (62%), Positives = 66/90 (73%) Frame = +2 Query: 11 HGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXX 190 HGSA+RCGV D FV TSLID+YGKCGEI ARK+FD+M E RNVVSWTAM Sbjct: 194 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSD 252 Query: 191 XXEAKKVFDVMPKRNVASWNAILRGFVKVG 280 EA+K+FD MP++N SWNAI+ G+VK G Sbjct: 253 LVEARKLFDEMPEKNAVSWNAIISGYVKCG 282 >ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Vitis vinifera] Length = 561 Score = 111 bits (278), Expect = 5e-23 Identities = 56/90 (62%), Positives = 66/90 (73%) Frame = +2 Query: 11 HGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXX 190 HGSA+RCGV D FV TSLID+YGKCGEI ARK+FD+M E RNVVSWTAM Sbjct: 146 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSD 204 Query: 191 XXEAKKVFDVMPKRNVASWNAILRGFVKVG 280 EA+K+FD MP++N SWNAI+ G+VK G Sbjct: 205 LVEARKLFDEMPEKNAVSWNAIISGYVKCG 234 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/73 (41%), Positives = 46/73 (63%) Frame = +2 Query: 62 SLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXXXXEAKKVFDVMPKRNVA 241 ++I Y KCG++ ARKMFD+M R NVVS+T M A+ VF+ P+R+V Sbjct: 225 AIISGYVKCGDLRSARKMFDEMPHR-NVVSFTTMIDGYAKSGDMASARFVFEEAPERDVV 283 Query: 242 SWNAILRGFVKVG 280 +W+A++ G+V+ G Sbjct: 284 AWSALISGYVQNG 296 >emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera] Length = 546 Score = 111 bits (278), Expect = 5e-23 Identities = 56/90 (62%), Positives = 66/90 (73%) Frame = +2 Query: 11 HGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXX 190 HGSA+RCGV D FV TSLID+YGKCGEI ARK+FD+M E RNVVSWTAM Sbjct: 146 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSD 204 Query: 191 XXEAKKVFDVMPKRNVASWNAILRGFVKVG 280 EA+K+FD MP++N SWNAI+ G+VK G Sbjct: 205 LVEARKLFDEMPEKNAVSWNAIISGYVKCG 234 >ref|XP_002530515.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223529919|gb|EEF31847.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 359 Score = 110 bits (274), Expect = 2e-22 Identities = 52/91 (57%), Positives = 68/91 (74%) Frame = +2 Query: 8 VHGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXX 187 VHGSA+RCGV DD +VG+SL+D YGKC EI ARKMFD+M++ +NVVSWTAM Sbjct: 34 VHGSAIRCGVSDDVYVGSSLVDFYGKCKEILSARKMFDEMTQ-KNVVSWTAMVVGYLNVG 92 Query: 188 XXXEAKKVFDVMPKRNVASWNAILRGFVKVG 280 A+++FD MP+RN+ SWNA++ G+VK G Sbjct: 93 DLGNAERLFDQMPERNLKSWNAMIDGWVKAG 123