BLASTX nr result

ID: Glycyrrhiza24_contig00032712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032712
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...   129   3e-28
emb|CBI30347.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...   111   5e-23
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]   111   5e-23
ref|XP_002530515.1| pentatricopeptide repeat-containing protein,...   110   2e-22

>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 566

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = +2

Query: 2   KSVHGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXX 181
           KS+HGSA RCGV+ D +VGTSLIDMYGKCGEI DARK+FD MS+ RNVVSWTAM      
Sbjct: 148 KSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSD-RNVVSWTAMLVGYVA 206

Query: 182 XXXXXEAKKVFDVMPKRNVASWNAILRGFVKVG 280
                EA+K+FD MP RNVASWN++L+GFVK+G
Sbjct: 207 VGDVVEARKLFDEMPHRNVASWNSMLQGFVKMG 239


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/90 (62%), Positives = 66/90 (73%)
 Frame = +2

Query: 11  HGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXX 190
           HGSA+RCGV  D FV TSLID+YGKCGEI  ARK+FD+M E RNVVSWTAM         
Sbjct: 194 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSD 252

Query: 191 XXEAKKVFDVMPKRNVASWNAILRGFVKVG 280
             EA+K+FD MP++N  SWNAI+ G+VK G
Sbjct: 253 LVEARKLFDEMPEKNAVSWNAIISGYVKCG 282


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/90 (62%), Positives = 66/90 (73%)
 Frame = +2

Query: 11  HGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXX 190
           HGSA+RCGV  D FV TSLID+YGKCGEI  ARK+FD+M E RNVVSWTAM         
Sbjct: 146 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSD 204

Query: 191 XXEAKKVFDVMPKRNVASWNAILRGFVKVG 280
             EA+K+FD MP++N  SWNAI+ G+VK G
Sbjct: 205 LVEARKLFDEMPEKNAVSWNAIISGYVKCG 234



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/73 (41%), Positives = 46/73 (63%)
 Frame = +2

Query: 62  SLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXXXXEAKKVFDVMPKRNVA 241
           ++I  Y KCG++  ARKMFD+M  R NVVS+T M            A+ VF+  P+R+V 
Sbjct: 225 AIISGYVKCGDLRSARKMFDEMPHR-NVVSFTTMIDGYAKSGDMASARFVFEEAPERDVV 283

Query: 242 SWNAILRGFVKVG 280
           +W+A++ G+V+ G
Sbjct: 284 AWSALISGYVQNG 296


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/90 (62%), Positives = 66/90 (73%)
 Frame = +2

Query: 11  HGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXX 190
           HGSA+RCGV  D FV TSLID+YGKCGEI  ARK+FD+M E RNVVSWTAM         
Sbjct: 146 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSD 204

Query: 191 XXEAKKVFDVMPKRNVASWNAILRGFVKVG 280
             EA+K+FD MP++N  SWNAI+ G+VK G
Sbjct: 205 LVEARKLFDEMPEKNAVSWNAIISGYVKCG 234


>ref|XP_002530515.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529919|gb|EEF31847.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 359

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/91 (57%), Positives = 68/91 (74%)
 Frame = +2

Query: 8   VHGSALRCGVEDDDFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXX 187
           VHGSA+RCGV DD +VG+SL+D YGKC EI  ARKMFD+M++ +NVVSWTAM        
Sbjct: 34  VHGSAIRCGVSDDVYVGSSLVDFYGKCKEILSARKMFDEMTQ-KNVVSWTAMVVGYLNVG 92

Query: 188 XXXEAKKVFDVMPKRNVASWNAILRGFVKVG 280
               A+++FD MP+RN+ SWNA++ G+VK G
Sbjct: 93  DLGNAERLFDQMPERNLKSWNAMIDGWVKAG 123


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