BLASTX nr result

ID: Glycyrrhiza24_contig00032709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032709
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like ...   212   3e-53
ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like ...   209   2e-52
ref|XP_003600705.1| Condensin complex subunit [Medicago truncatu...   209   2e-52
ref|XP_002534298.1| conserved hypothetical protein [Ricinus comm...   170   1e-40
ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   165   3e-39

>ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1033

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/113 (87%), Positives = 109/113 (96%)
 Frame = -3

Query: 340  LTSNEDECIYAVLGEGFAKILLLSDNYPSIPSSLHPVLLSKIIYLYFSDVSENLHRLKQC 161
            L SNEDEC++A+LGEGFAKILLLSDNYPSIP+SLHPV+LSK+IYLYF+DVSE+LHRLKQC
Sbjct: 674  LPSNEDECVHAILGEGFAKILLLSDNYPSIPASLHPVILSKLIYLYFTDVSEHLHRLKQC 733

Query: 160  LSVFFEHYPCLSANHKRCISKAFIPVMRSMWPGIFGNSGGSTFMVSQMRKRAV 2
            LSVFFE YPCLSANHKRCI+K+FIP MRSMWPGIFGNS GSTFMVSQMRKRAV
Sbjct: 734  LSVFFELYPCLSANHKRCITKSFIPAMRSMWPGIFGNSAGSTFMVSQMRKRAV 786


>ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1096

 Score =  209 bits (531), Expect = 2e-52
 Identities = 98/113 (86%), Positives = 108/113 (95%)
 Frame = -3

Query: 340  LTSNEDECIYAVLGEGFAKILLLSDNYPSIPSSLHPVLLSKIIYLYFSDVSENLHRLKQC 161
            L SNEDEC++A+LGEGFAKILLLS+NYPSIP+SLHPV+LSK+IYLYFSDVSE+LHRLKQC
Sbjct: 737  LPSNEDECVHAILGEGFAKILLLSNNYPSIPASLHPVILSKLIYLYFSDVSEHLHRLKQC 796

Query: 160  LSVFFEHYPCLSANHKRCISKAFIPVMRSMWPGIFGNSGGSTFMVSQMRKRAV 2
            LSVFFE YPCLSANHK CI+K+FIP MRSMWPGIFGNS GSTFMVSQMRKRAV
Sbjct: 797  LSVFFELYPCLSANHKSCITKSFIPAMRSMWPGIFGNSSGSTFMVSQMRKRAV 849


>ref|XP_003600705.1| Condensin complex subunit [Medicago truncatula]
            gi|355489753|gb|AES70956.1| Condensin complex subunit
            [Medicago truncatula]
          Length = 1076

 Score =  209 bits (531), Expect = 2e-52
 Identities = 105/119 (88%), Positives = 108/119 (90%), Gaps = 6/119 (5%)
 Frame = -3

Query: 340  LTSNEDECIYAVLGEGFAKILLLSDNYPSIPSSLHPVLLSKIIYLYFSDVSENLHR-LKQ 164
            LTSNEDECIYAVLGEGFAKILLLSDNYPSI +SLHPVLLSK+IYLYFSDVSEN+HR LKQ
Sbjct: 705  LTSNEDECIYAVLGEGFAKILLLSDNYPSISASLHPVLLSKLIYLYFSDVSENMHRWLKQ 764

Query: 163  CLSVFFEHYPCLSANHK-----RCISKAFIPVMRSMWPGIFGNSGGSTFMVSQMRKRAV 2
            CLSVFFEHYPCLS NHK     RCI KAFIP MRSMWPGIFGNSGGS FMVSQMRKRAV
Sbjct: 765  CLSVFFEHYPCLSTNHKASIIDRCILKAFIPAMRSMWPGIFGNSGGSPFMVSQMRKRAV 823


>ref|XP_002534298.1| conserved hypothetical protein [Ricinus communis]
           gi|223525547|gb|EEF28084.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/112 (71%), Positives = 99/112 (88%), Gaps = 2/112 (1%)
 Frame = -3

Query: 331 NEDECIYAVLGEGFAKILLLSDNYPSIPSSLHPVLLSKIIYLYFSDVSENLHRLKQCLSV 152
           +E+E +  +LGEGFAKILLLS+NY SIP+ LHP+LL K+I LYFS+ +++L RLKQCLSV
Sbjct: 63  DENETVQGILGEGFAKILLLSENYASIPTPLHPLLLVKLIILYFSNETKDLERLKQCLSV 122

Query: 151 FFEHYPCLSANHK--RCISKAFIPVMRSMWPGIFGNSGGSTFMVSQMRKRAV 2
           FFEHYPCLSANHK  +C+SKAF+PVMRSMWPGI+GN+GGS+ +VS MRKRAV
Sbjct: 123 FFEHYPCLSANHKASKCLSKAFVPVMRSMWPGIYGNAGGSSSVVSNMRKRAV 174


>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
            gi|297745068|emb|CBI38660.3| unnamed protein product
            [Vitis vinifera]
          Length = 1036

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/110 (70%), Positives = 95/110 (86%)
 Frame = -3

Query: 331  NEDECIYAVLGEGFAKILLLSDNYPSIPSSLHPVLLSKIIYLYFSDVSENLHRLKQCLSV 152
            +E+E + A+LGEGFAKILLLS+NYP IP+SLHP+ LSK+I LYFS+ ++ L RLKQCLSV
Sbjct: 673  DENESVQAILGEGFAKILLLSENYPCIPASLHPLFLSKLIILYFSNETKELQRLKQCLSV 732

Query: 151  FFEHYPCLSANHKRCISKAFIPVMRSMWPGIFGNSGGSTFMVSQMRKRAV 2
            FFEHYP LSA+HK+CISK+F+PVMRSMWPGI   +GGS FMVS +RK AV
Sbjct: 733  FFEHYPSLSADHKKCISKSFMPVMRSMWPGINTRAGGSPFMVSNVRKLAV 782


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