BLASTX nr result

ID: Glycyrrhiza24_contig00032708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032708
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543800.1| PREDICTED: sister chromatid cohesion protein...    82   3e-14
ref|XP_002513802.1| androgen induced inhibitor of proliferation ...    67   1e-09
ref|XP_002302238.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_004166769.1| PREDICTED: LOW QUALITY PROTEIN: sister chrom...    57   2e-06
ref|XP_004142698.1| PREDICTED: sister chromatid cohesion protein...    57   2e-06

>ref|XP_003543800.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
           [Glycine max]
          Length = 1300

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = -2

Query: 179 DEPSLQLVSEIGTRLARRTRPNKDFIVKSLQKAVNALSQLEQSPQPQTAGEVQAA 15
           DE SLQLVSEIG  LA RTRPNKDF+VKSL KA NAL+ ++QSPQP+TA EVQAA
Sbjct: 2   DESSLQLVSEIGRHLAHRTRPNKDFLVKSLGKAANALALIKQSPQPRTAKEVQAA 56


>ref|XP_002513802.1| androgen induced inhibitor of proliferation (as3) / pds5, putative
           [Ricinus communis] gi|223546888|gb|EEF48385.1| androgen
           induced inhibitor of proliferation (as3) / pds5,
           putative [Ricinus communis]
          Length = 1332

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -2

Query: 179 DEPSLQLVSEIGTRLARRTRPNKDFIVKSLQKAVNALSQLEQSPQPQTAGEVQAANALS 3
           DE SLQLVSEIG +L R  RPNKDF+VKSL++A NAL+Q+E    P+ + + +A N L+
Sbjct: 2   DESSLQLVSEIGIQLGRLARPNKDFLVKSLRQAANALAQIEPPSPPEASRKKEAVNKLA 60


>ref|XP_002302238.1| predicted protein [Populus trichocarpa] gi|222843964|gb|EEE81511.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -2

Query: 179 DEPSLQLVSEIGTRLARRTRPNKDFIVKSLQKAVNALSQLEQ 54
           DE  LQLVSEIG  L R  RPNKDF+VKSL++A NALSQ+EQ
Sbjct: 2   DESPLQLVSEIGDHLGRHARPNKDFLVKSLRQAANALSQIEQ 43


>ref|XP_004166769.1| PREDICTED: LOW QUALITY PROTEIN: sister chromatid cohesion protein
           PDS5 homolog A-like [Cucumis sativus]
          Length = 1113

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/58 (44%), Positives = 41/58 (70%)
 Frame = -2

Query: 179 DEPSLQLVSEIGTRLARRTRPNKDFIVKSLQKAVNALSQLEQSPQPQTAGEVQAANAL 6
           D  SLQL+ ++GT+L++ +RP KD+IVKSL++ V+A ++LEQS       + + AN L
Sbjct: 2   DHSSLQLIRDVGTKLSKHSRPTKDYIVKSLRQVVDAFARLEQSHVSDARAKSEPANKL 59


>ref|XP_004142698.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
           [Cucumis sativus]
          Length = 1113

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/58 (44%), Positives = 41/58 (70%)
 Frame = -2

Query: 179 DEPSLQLVSEIGTRLARRTRPNKDFIVKSLQKAVNALSQLEQSPQPQTAGEVQAANAL 6
           D  SLQL+ ++GT+L++ +RP KD+IVKSL++ V+A ++LEQS       + + AN L
Sbjct: 2   DHSSLQLIRDVGTKLSKHSRPTKDYIVKSLRQVVDAFARLEQSHVSDARAKSEPANKL 59


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