BLASTX nr result

ID: Glycyrrhiza24_contig00032697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032697
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820...   125   4e-27
ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
emb|CBI21495.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...    91   7e-17
ref|NP_201300.1| Mitochondrial transcription termination factor ...    83   2e-14

>ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820280 [Glycine max]
          Length = 1401

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/82 (74%), Positives = 71/82 (86%)
 Frame = +2

Query: 2    NSRMFVHALLTICGLSFKTFSRKLELIQCFGFSKDESLQMFKRSPGLLRTSEKKLKVGVE 181
            NSRM VHA+ +I  LS+KTF RKL+LI CFGFS +E LQMF+RSP LLRTSEKK+KVG+E
Sbjct: 1255 NSRMLVHAIHSISSLSYKTFRRKLKLIICFGFSNEEGLQMFRRSPTLLRTSEKKVKVGLE 1314

Query: 182  FFLHTVMLSKSVLVHRPMILMY 247
            FFLHTVML KSVLVH+P +LMY
Sbjct: 1315 FFLHTVMLPKSVLVHQPRVLMY 1336


>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/81 (51%), Positives = 64/81 (79%)
 Frame = +2

Query: 2   NSRMFVHALLTICGLSFKTFSRKLELIQCFGFSKDESLQMFKRSPGLLRTSEKKLKVGVE 181
           NSRM V+AL T+  +S +TF +K+E+++ FGFS+ E  +MF++ PGLLR+SEKKLK+G++
Sbjct: 214 NSRMLVYALYTVSCMSHETFGKKIEILKKFGFSEYECTEMFRKQPGLLRSSEKKLKLGLD 273

Query: 182 FFLHTVMLSKSVLVHRPMILM 244
           FF++T+   + VLV+RP  LM
Sbjct: 274 FFINTIKFKREVLVYRPTCLM 294


>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/80 (53%), Positives = 62/80 (77%)
 Frame = +2

Query: 5   SRMFVHALLTICGLSFKTFSRKLELIQCFGFSKDESLQMFKRSPGLLRTSEKKLKVGVEF 184
           SRM V+AL TI  L  +T  +K EL + +GF++ E ++MF+R+PGLLR SE+KLK+G+EF
Sbjct: 221 SRMLVYALYTISCLRDETLRKKFELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEF 280

Query: 185 FLHTVMLSKSVLVHRPMILM 244
           F++T+   K++LVHRP ILM
Sbjct: 281 FMNTMKFEKTLLVHRPTILM 300


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/80 (53%), Positives = 62/80 (77%)
 Frame = +2

Query: 5   SRMFVHALLTICGLSFKTFSRKLELIQCFGFSKDESLQMFKRSPGLLRTSEKKLKVGVEF 184
           SRM V+AL TI  L  +T  +K EL + +GF++ E ++MF+R+PGLLR SE+KLK+G+EF
Sbjct: 240 SRMLVYALYTISCLRDETLRKKFELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEF 299

Query: 185 FLHTVMLSKSVLVHRPMILM 244
           F++T+   K++LVHRP ILM
Sbjct: 300 FMNTMKFEKTLLVHRPTILM 319


>ref|NP_201300.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|8843759|dbj|BAA97307.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332010591|gb|AED97974.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 391

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/82 (48%), Positives = 55/82 (67%)
 Frame = +2

Query: 2   NSRMFVHALLTICGLSFKTFSRKLELIQCFGFSKDESLQMFKRSPGLLRTSEKKLKVGVE 181
           NSRM VHA++++  LS KTF RK++L    GFS+DE   + +RSPGL+R SE KL +G E
Sbjct: 231 NSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFE 290

Query: 182 FFLHTVMLSKSVLVHRPMILMY 247
           F+L  + L +  L  RP +L Y
Sbjct: 291 FYLKRMGLEREALAKRPCVLSY 312


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