BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032694
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    85   5e-15
gb|AAM09536.1| reverse transcriptase [Medicago sativa]                 83   2e-14
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    77   1e-12

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/89 (41%), Positives = 51/89 (57%)
 Frame = +2

Query: 2    SAMLKLCWDFINSKGHWACLLKARVLRNNVSINYNIQSSIWAGLRSSFHTMMINSSWQIG 181
            +AMLKL W+ ++S   WA LLK R       I Y ++SS+W G+++    +  N  W +G
Sbjct: 801  AAMLKLAWNLLSSNSQWAVLLKRRFFSQGQPIRYFVKSSVWHGVKNHMSILRQNKLWIVG 860

Query: 182  NGRDINFWTDKWLSEPLVNLINIPASLHS 268
             G  IN WT+ WL EPLV L NI    H+
Sbjct: 861  TGDRINLWTNNWLGEPLVTLFNIDPFFHA 889


>gb|AAM09536.1| reverse transcriptase [Medicago sativa]
          Length = 168

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/89 (41%), Positives = 53/89 (59%)
 Frame = +2

Query: 2   SAMLKLCWDFINSKGHWACLLKARVLRNNVSINYNIQSSIWAGLRSSFHTMMINSSWQIG 181
           +++L L W  I S   WA + + R L N    ++ I SS+W GL+S+   +  +S W +G
Sbjct: 28  ASLLLLTWKLITSNEQWAHICRVRFLNNYTPKSHYITSSVWPGLKSNIQYIFYHSIWTVG 87

Query: 182 NGRDINFWTDKWLSEPLVNLINIPASLHS 268
           NGR+I FW+DKWL  P+    NIP SL S
Sbjct: 88  NGRNIRFWSDKWLDSPIAEHWNIPPSLIS 116


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/89 (37%), Positives = 50/89 (56%)
 Frame = +2

Query: 2   SAMLKLCWDFINSKGHWACLLKARVLRNNVSINYNIQSSIWAGLRSSFHTMMINSSWQIG 181
           S +L L W F  +   WA L+  R L++   + +   SS+W G++    T+  NS W +G
Sbjct: 338 SLILLLAWQFSTADSQWAALMHHRFLKHGTPLQHYFLSSMWGGIKEHLSTISSNSIWIVG 397

Query: 182 NGRDINFWTDKWLSEPLVNLINIPASLHS 268
            G +IN WTD WL   LV+ +NI  +LH+
Sbjct: 398 TGANINLWTDNWLGIRLVDSLNISPTLHT 426