BLASTX nr result

ID: Glycyrrhiza24_contig00032688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032688
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPas...   142   2e-32
ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...   119   3e-25
emb|CBI17533.3| unnamed protein product [Vitis vinifera]              119   3e-25
emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera]   119   3e-25
ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   118   6e-25

>ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPase [Medicago truncatula]
           gi|355513315|gb|AES94938.1| Swi2/Snf2-related chromatin
           remodeling ATPase [Medicago truncatula]
          Length = 750

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/89 (75%), Positives = 74/89 (83%)
 Frame = +1

Query: 1   HQKSLQDHLINETMGKYLEEKLSIGRAKTKLNNLVIQLRKVCNHPDLLDSAFDGSYFYPP 180
           HQK+LQDHLINET+GKYL++K SIGRA T LNNLVIQLRKVCNHPDLL+S FDGSYFYPP
Sbjct: 438 HQKNLQDHLINETLGKYLDKKRSIGRAPTSLNNLVIQLRKVCNHPDLLESVFDGSYFYPP 497

Query: 181 VNVLIEQCGKFHXXXXXXXXXFARNHKVL 267
           VN +IE+CGKF          FARNHKVL
Sbjct: 498 VNEIIEKCGKFQLLDRLLERLFARNHKVL 526


>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   HQKSLQDHLINETMGKYLEEKLSIGRA-KTKLNNLVIQLRKVCNHPDLLDSAFDGSYFYP 177
           HQK+ +DHL+N+T+  YL+EK S GR  K KLNNL++QLRK CNHPDLL+SAFDGSY YP
Sbjct: 444 HQKNFKDHLVNKTLENYLKEKASTGRGVKGKLNNLMVQLRKNCNHPDLLESAFDGSYLYP 503

Query: 178 PVNVLIEQCGKFHXXXXXXXXXFARNHKVL 267
           PV  ++EQCGKF          FAR HKVL
Sbjct: 504 PVEQIVEQCGKFRLLDRLLARLFARKHKVL 533


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   HQKSLQDHLINETMGKYLEEKLSIGRA-KTKLNNLVIQLRKVCNHPDLLDSAFDGSYFYP 177
           HQK+ +DHL+N+T+  YL+EK S GR  K KLNNL++QLRK CNHPDLL+SAFDGSY YP
Sbjct: 485 HQKNFKDHLVNKTLENYLKEKASTGRGVKGKLNNLMVQLRKNCNHPDLLESAFDGSYLYP 544

Query: 178 PVNVLIEQCGKFHXXXXXXXXXFARNHKVL 267
           PV  ++EQCGKF          FAR HKVL
Sbjct: 545 PVEQIVEQCGKFRLLDRLLARLFARKHKVL 574


>emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera]
          Length = 716

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   HQKSLQDHLINETMGKYLEEKLSIGRA-KTKLNNLVIQLRKVCNHPDLLDSAFDGSYFYP 177
           HQK+ +DHL+N+T+  YL+EK S GR  K KLNNL++QLRK CNHPDLL+SAFDGSY YP
Sbjct: 381 HQKNFKDHLVNKTLENYLKEKASTGRGVKGKLNNLMVQLRKNCNHPDLLESAFDGSYLYP 440

Query: 178 PVNVLIEQCGKFHXXXXXXXXXFARNHKVL 267
           PV  ++EQCGKF          FAR HKVL
Sbjct: 441 PVEQIVEQCGKFRLLDRLLARLFARKHKVL 470


>ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 943

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1   HQKSLQDHLINETMGKYLEEKLSIGRAKTK--LNNLVIQLRKVCNHPDLLDSAFDGSYFY 174
           HQK+LQDHL+N+T+G YL+E +S GR+     + NL IQLRKVCNHPDLL+SAFD SY Y
Sbjct: 627 HQKNLQDHLVNKTLGNYLKENMSSGRSVPAGMIRNLAIQLRKVCNHPDLLESAFDDSYLY 686

Query: 175 PPVNVLIEQCGKFHXXXXXXXXXFARNHKVL 267
           PP+  ++ QCGKFH         FARNHKVL
Sbjct: 687 PPLEEIVGQCGKFHLLDRLLQRLFARNHKVL 717


Top