BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032681
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...    76   3e-12
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...    68   9e-10

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/78 (56%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = +2

Query: 14  KKGVVTLIETSRDFKLFED---LPEPVAIPGQTPQEAASLSREFAKRALVFSGRRLMPVG 184
           +KGVVTL+ET +DF LF D     + V  PGQT  EA +L REF KR L FSGRRL   G
Sbjct: 127 RKGVVTLVETEKDFALFGDEFTQNQVVPCPGQTLPEAEALQREFHKRTLAFSGRRLSVSG 186

Query: 185 LPEDHSTDPFASPLPRGP 238
           LP    +DPFASP P  P
Sbjct: 187 LPS--GSDPFASPSPVRP 202


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/64 (59%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
 Frame = +2

Query: 11  AKKGVVTLIETSRDFKLFED---LPEPVAIPGQTPQEAASLSREFAKRALVFSGRRLMPV 181
           A+KGVVTL+ET +DF LF D     + V  PGQT  EA SL REF KRA  FSG+RL   
Sbjct: 126 ARKGVVTLVETEKDFALFCDEFTQNQVVPCPGQTLSEAESLQREFHKRAFAFSGKRLSVS 185

Query: 182 GLPE 193
           GLPE
Sbjct: 186 GLPE 189