BLASTX nr result

ID: Glycyrrhiza24_contig00032678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032678
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605629.1| TATA-binding protein-associated factor [Medi...   143   1e-32
ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated f...   139   3e-31
ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated f...   139   3e-31
ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated f...   138   4e-31
ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f...   114   8e-24

>ref|XP_003605629.1| TATA-binding protein-associated factor [Medicago truncatula]
           gi|355506684|gb|AES87826.1| TATA-binding
           protein-associated factor [Medicago truncatula]
          Length = 1477

 Score =  143 bits (361), Expect = 1e-32
 Identities = 75/94 (79%), Positives = 77/94 (81%)
 Frame = -2

Query: 283 KQKSKVHVLAGEDRSKVEGFXXXXXXXXXXXXLCEKFGVLLFDKLPKLWDCLTEVLKPSS 104
           KQKSKVHVL GEDRSKVEGF            LCEKFGVLLFDKLPKLWDCLTEVLKPSS
Sbjct: 615 KQKSKVHVLTGEDRSKVEGFISRRGSEQSLRLLCEKFGVLLFDKLPKLWDCLTEVLKPSS 674

Query: 103 FESLLACNEKQATVTIESVSDPQTLINNIQVVRS 2
            ESLLA NE++ TV IESVSDPQTLINNIQVVRS
Sbjct: 675 SESLLAANEEEDTVAIESVSDPQTLINNIQVVRS 708


>ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 2
            [Glycine max]
          Length = 2064

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/94 (77%), Positives = 75/94 (79%)
 Frame = -2

Query: 283  KQKSKVHVLAGEDRSKVEGFXXXXXXXXXXXXLCEKFGVLLFDKLPKLWDCLTEVLKPSS 104
            KQK KVHVLAGEDRSKVEGF            LCEKFGV LFDKLPKLWDCLTEVLKPSS
Sbjct: 1201 KQKLKVHVLAGEDRSKVEGFLSRRGSELALRHLCEKFGVSLFDKLPKLWDCLTEVLKPSS 1260

Query: 103  FESLLACNEKQATVTIESVSDPQTLINNIQVVRS 2
             ESLL  NEK AT++IESVSDPQ LINNIQVVRS
Sbjct: 1261 SESLLVTNEKSATLSIESVSDPQALINNIQVVRS 1294


>ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 1
            [Glycine max]
          Length = 2047

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/94 (77%), Positives = 75/94 (79%)
 Frame = -2

Query: 283  KQKSKVHVLAGEDRSKVEGFXXXXXXXXXXXXLCEKFGVLLFDKLPKLWDCLTEVLKPSS 104
            KQK KVHVLAGEDRSKVEGF            LCEKFGV LFDKLPKLWDCLTEVLKPSS
Sbjct: 1184 KQKLKVHVLAGEDRSKVEGFLSRRGSELALRHLCEKFGVSLFDKLPKLWDCLTEVLKPSS 1243

Query: 103  FESLLACNEKQATVTIESVSDPQTLINNIQVVRS 2
             ESLL  NEK AT++IESVSDPQ LINNIQVVRS
Sbjct: 1244 SESLLVTNEKSATLSIESVSDPQALINNIQVVRS 1277


>ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated factor 172-like [Glycine
            max]
          Length = 2047

 Score =  138 bits (348), Expect = 4e-31
 Identities = 72/94 (76%), Positives = 75/94 (79%)
 Frame = -2

Query: 283  KQKSKVHVLAGEDRSKVEGFXXXXXXXXXXXXLCEKFGVLLFDKLPKLWDCLTEVLKPSS 104
            KQKSKVHVLAGEDRSKVEGF            LCEKFG  LFDKLPKLWDCLTEVLKPSS
Sbjct: 1184 KQKSKVHVLAGEDRSKVEGFLSRRGSELALRLLCEKFGASLFDKLPKLWDCLTEVLKPSS 1243

Query: 103  FESLLACNEKQATVTIESVSDPQTLINNIQVVRS 2
             ESLL  NEK  T++IESV+DPQTLINNIQVVRS
Sbjct: 1244 SESLLVTNEKPVTMSIESVNDPQTLINNIQVVRS 1277


>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
            [Vitis vinifera]
          Length = 2060

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/95 (64%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
 Frame = -2

Query: 283  KQKSKVHVLAG-EDRSKVEGFXXXXXXXXXXXXLCEKFGVLLFDKLPKLWDCLTEVLKPS 107
            KQKSKVH+LAG EDRSKVEGF            LCEKFG  LFDKLPKLWDCLTEVLKP 
Sbjct: 1196 KQKSKVHILAGGEDRSKVEGFISRRGSELTLKHLCEKFGASLFDKLPKLWDCLTEVLKPG 1255

Query: 106  SFESLLACNEKQATVTIESVSDPQTLINNIQVVRS 2
            S   L   +E +     ES+ DPQ LINNIQVVRS
Sbjct: 1256 SIAELTPEDENETKPVFESIKDPQILINNIQVVRS 1290


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