BLASTX nr result

ID: Glycyrrhiza24_contig00032674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032674
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637393.1| MutS2 family protein [Medicago truncatula] g...   132   2e-29
ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Gly...   132   4e-29
ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Gly...   132   4e-29
ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
gb|EEC78264.1| hypothetical protein OsI_17950 [Oryza sativa Indi...    77   1e-12

>ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
           gi|355503328|gb|AES84531.1| MutS2 family protein
           [Medicago truncatula]
          Length = 913

 Score =  132 bits (333), Expect = 2e-29
 Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 3/103 (2%)
 Frame = +1

Query: 19  MQLSCSNLLISVKKPP--QVLFRPRFCNSAESKSVQAESLKILEWSSICKQLSAFTSTSL 192
           MQL+C NL I + KP   ++ F+PRFC S ES SVQ++SLK LEW+SICKQLSAFTSTS+
Sbjct: 1   MQLTC-NLFIPINKPSIHRLSFKPRFCYSTESNSVQSDSLKTLEWNSICKQLSAFTSTSM 59

Query: 193 GSSAANNARLPVGRTPQESQRLLNQTSAARLIPRPP-DYFGIH 318
           GSSAANNARLPVG TP  SQ+LL+QTSAARL+P+   D+ GIH
Sbjct: 60  GSSAANNARLPVGLTPHHSQKLLDQTSAARLVPQQQLDFSGIH 102


>ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
          Length = 902

 Score =  132 bits (331), Expect = 4e-29
 Identities = 70/104 (67%), Positives = 85/104 (81%), Gaps = 4/104 (3%)
 Frame = +1

Query: 19  MQLSCSNLLISVKKPPQVLF-RPRFC---NSAESKSVQAESLKILEWSSICKQLSAFTST 186
           MQLS SN+LI   KPP+ LF +PRFC   NS ES S+QAE+LK LEW S+CKQLSAFTST
Sbjct: 1   MQLS-SNVLIPANKPPRPLFFKPRFCSNPNSPESNSLQAETLKTLEWGSVCKQLSAFTST 59

Query: 187 SLGSSAANNARLPVGRTPQESQRLLNQTSAARLIPRPPDYFGIH 318
           S+GS+AA NARLP+GRT ++SQRLL+QTSAARL+  P D+ G+H
Sbjct: 60  SMGSAAALNARLPIGRTRRDSQRLLDQTSAARLVAEPLDFSGVH 103


>ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
          Length = 914

 Score =  132 bits (331), Expect = 4e-29
 Identities = 70/104 (67%), Positives = 85/104 (81%), Gaps = 4/104 (3%)
 Frame = +1

Query: 19  MQLSCSNLLISVKKPPQVLF-RPRFC---NSAESKSVQAESLKILEWSSICKQLSAFTST 186
           MQLS SN+LI   KPP+ LF +PRFC   NS ES S+QAE+LK LEW S+CKQLSAFTST
Sbjct: 1   MQLS-SNVLIPANKPPRPLFFKPRFCSNPNSPESNSLQAETLKTLEWGSVCKQLSAFTST 59

Query: 187 SLGSSAANNARLPVGRTPQESQRLLNQTSAARLIPRPPDYFGIH 318
           S+GS+AA NARLP+GRT ++SQRLL+QTSAARL+  P D+ G+H
Sbjct: 60  SMGSAAALNARLPIGRTRRDSQRLLDQTSAARLVAEPLDFSGVH 103


>ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|222848769|gb|EEE86316.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 18/115 (15%)
 Frame = +1

Query: 25  LSCSNLLISVKKPPQVLF--RPRFCNSAESK--------------SVQAESLKILEWSSI 156
           +  SN  IS+KK P + F  +P F   A +K              S+Q E+LKILEWSS+
Sbjct: 1   MELSNHFISIKKSPILFFTTKPPFSTKALTKPFDSHSPKLTSPAHSLQLETLKILEWSSL 60

Query: 157 CKQLSAFTSTSLGSSAANNARLPVGRTPQESQRLLNQTSAARLIPR--PPDYFGI 315
           C QL+ FTSTS+G S   NA++P+G++ +ESQ+LL+QT+AA  +    P D+ GI
Sbjct: 61  CNQLTPFTSTSMGQSITRNAKIPIGKSKEESQKLLDQTAAALAVMESGPLDFSGI 115


>gb|EEC78264.1| hypothetical protein OsI_17950 [Oryza sativa Indica Group]
          Length = 916

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 10/104 (9%)
 Frame = +1

Query: 34  SNLLISVKKPP----------QVLFRPRFCNSAESKSVQAESLKILEWSSICKQLSAFTS 183
           + L+ S + PP          Q L  P    + E+K ++ E+   LEW  +C +L+ F S
Sbjct: 29  TGLVCSARTPPPRLRAAAAASQALTSPVAAETPEAKQMRVETEAALEWGGVCARLAGFAS 88

Query: 184 TSLGSSAANNARLPVGRTPQESQRLLNQTSAARLIPRPPDYFGI 315
           T+ G +A    R+PVGR+ +ES+RLL QT+AA L+P P D+ G+
Sbjct: 89  TAAGRAACGEGRVPVGRSREESERLLEQTAAAALLPAPLDFGGV 132


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