BLASTX nr result

ID: Glycyrrhiza24_contig00032669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032669
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532217.1| PREDICTED: villin-1-like isoform 1 [Glycine ...   187   8e-46
ref|XP_003552969.1| PREDICTED: villin-1-like [Glycine max]            170   1e-40
ref|XP_003532218.1| PREDICTED: villin-1-like isoform 2 [Glycine ...   165   4e-39
ref|XP_002314108.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
gb|ABK95801.1| unknown [Populus trichocarpa]                           93   2e-17

>ref|XP_003532217.1| PREDICTED: villin-1-like isoform 1 [Glycine max]
          Length = 913

 Score =  187 bits (475), Expect = 8e-46
 Identities = 97/141 (68%), Positives = 103/141 (73%)
 Frame = +3

Query: 3    PFFTRFFSWDHSKANIVGNSFERKLAILKGKTKTLEGHNRIPLKASSRDSTPNGHXXXXX 182
            PFFTRFFSWDHS  NIVGNSFERKLAILKGK KTLEGHNR PLKA+SR STPNGH     
Sbjct: 709  PFFTRFFSWDHSNENIVGNSFERKLAILKGKPKTLEGHNRTPLKANSRPSTPNGHRNISV 768

Query: 183  XXXXXXXXXXXXXXXXXXXLRQSGGRLLSSPSPVAKKLFEGSPANSSAEQTMPLSGSPAT 362
                               LRQSG RLLSS +PV KKL EGSP++ SAE+TMP SGSPAT
Sbjct: 769  FSNGRGRSSSPILSSAGSDLRQSGDRLLSSSTPVVKKLLEGSPSHGSAEKTMPQSGSPAT 828

Query: 363  ELSSSNENASFTQKDRNVDGE 425
            ELSSS+E  SF QKDRNVDGE
Sbjct: 829  ELSSSDETVSFPQKDRNVDGE 849


>ref|XP_003552969.1| PREDICTED: villin-1-like [Glycine max]
          Length = 972

 Score =  170 bits (430), Expect = 1e-40
 Identities = 92/141 (65%), Positives = 98/141 (69%)
 Frame = +3

Query: 3    PFFTRFFSWDHSKANIVGNSFERKLAILKGKTKTLEGHNRIPLKASSRDSTPNGHXXXXX 182
            PFFTRFFSWDHSK NI GNSFERKLAILKGK K+LEGHNR PLKA+SR STP+GH     
Sbjct: 775  PFFTRFFSWDHSKENIFGNSFERKLAILKGKPKSLEGHNRTPLKANSRPSTPDGHGSISV 834

Query: 183  XXXXXXXXXXXXXXXXXXXLRQSGGRLLSSPSPVAKKLFEGSPANSSAEQTMPLSGSPAT 362
                               LRQSG R LSS +PV KKLFEGSP+ SS       SGSPAT
Sbjct: 835  FSNGRGRSSSPIPSSAGSDLRQSGDRSLSSSTPVVKKLFEGSPSQSS-------SGSPAT 887

Query: 363  ELSSSNENASFTQKDRNVDGE 425
            ELSSS+E ASF QKDRNVDGE
Sbjct: 888  ELSSSDETASFPQKDRNVDGE 908


>ref|XP_003532218.1| PREDICTED: villin-1-like isoform 2 [Glycine max]
          Length = 905

 Score =  165 bits (417), Expect = 4e-39
 Identities = 92/145 (63%), Positives = 97/145 (66%), Gaps = 4/145 (2%)
 Frame = +3

Query: 3    PFFTRFFSWDHSKANIVGNSFERKLAILKGKTKTLE----GHNRIPLKASSRDSTPNGHX 170
            PFFTRFFSWDHS  NIVGNSFERKLAILKGK KTLE    GHNR PLKA+SR STPNGH 
Sbjct: 704  PFFTRFFSWDHSNENIVGNSFERKLAILKGKPKTLEVPDWGHNRTPLKANSRPSTPNGHR 763

Query: 171  XXXXXXXXXXXXXXXXXXXXXXXLRQSGGRLLSSPSPVAKKLFEGSPANSSAEQTMPLSG 350
                                   LRQSG RLLSS +PV KKL EGSP++ S       SG
Sbjct: 764  NISVFSNGRGRSSSPILSSAGSDLRQSGDRLLSSSTPVVKKLLEGSPSHGS-------SG 816

Query: 351  SPATELSSSNENASFTQKDRNVDGE 425
            SPATELSSS+E  SF QKDRNVDGE
Sbjct: 817  SPATELSSSDETVSFPQKDRNVDGE 841


>ref|XP_002314108.1| predicted protein [Populus trichocarpa] gi|222850516|gb|EEE88063.1|
            predicted protein [Populus trichocarpa]
          Length = 902

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/136 (41%), Positives = 72/136 (52%)
 Frame = +3

Query: 6    FFTRFFSWDHSKANIVGNSFERKLAILKGKTKTLEGHNRIPLKASSRDSTPNGHXXXXXX 185
            FFTRFF WD SKAN+ GNSFER+LAILKGK + LE H     KASS+++TP+G       
Sbjct: 707  FFTRFFEWDSSKANMHGNSFERRLAILKGKKQNLEVHTSKSWKASSKETTPDG-LRSKSV 765

Query: 186  XXXXXXXXXXXXXXXXXXLRQSGGRLLSSPSPVAKKLFEGSPANSSAEQTMPLSGSPATE 365
                                 S    +S+P+P A+KLF GSP + SA       GSP  E
Sbjct: 766  SSNGRNSTSPVSSASVTHFNSSTNCQISTPAPTARKLFPGSPFHDSA-------GSPKAE 818

Query: 366  LSSSNENASFTQKDRN 413
              S ++ A  +Q D N
Sbjct: 819  AESPSQAAVLSQVDGN 834


>gb|ABK95801.1| unknown [Populus trichocarpa]
          Length = 375

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/136 (41%), Positives = 72/136 (52%)
 Frame = +3

Query: 6   FFTRFFSWDHSKANIVGNSFERKLAILKGKTKTLEGHNRIPLKASSRDSTPNGHXXXXXX 185
           FFTRFF WD SKAN+ GNSFER+LAILKGK + LE H     KASS+++TP+G       
Sbjct: 180 FFTRFFEWDSSKANMHGNSFERRLAILKGKKQNLEVHTSKSWKASSKETTPDG-LRSKSV 238

Query: 186 XXXXXXXXXXXXXXXXXXLRQSGGRLLSSPSPVAKKLFEGSPANSSAEQTMPLSGSPATE 365
                                S    +S+P+P A+KLF GSP + SA       GSP  E
Sbjct: 239 SSNGRNSTSPVSSASVTHFNSSTNCQISTPAPTARKLFPGSPFHDSA-------GSPKAE 291

Query: 366 LSSSNENASFTQKDRN 413
             S ++ A  +Q D N
Sbjct: 292 AESPSQAAVLSQVDGN 307


Top