BLASTX nr result

ID: Glycyrrhiza24_contig00032662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032662
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791...   164   7e-39
ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800...   153   1e-35
ref|XP_003607305.1| Chromodomain helicase DNA binding protein [M...    89   4e-16
emb|CAN78969.1| hypothetical protein VITISV_022739 [Vitis vinifera]    80   2e-13
ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260...    79   5e-13

>ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791832 [Glycine max]
          Length = 1702

 Score =  164 bits (415), Expect = 7e-39
 Identities = 81/106 (76%), Positives = 91/106 (85%)
 Frame = +3

Query: 6    QMRSGIENVQMHRLYDSNRSDESLNQSGIPEKHLPIGDCSLTSSSLDVGRKINLRSVGAS 185
            Q R+GI+NVQ++ L DSNR DESLNQ GIPE+  P+GDCSLTSSSLDVGRKINLRSVG+S
Sbjct: 867  QTRTGIDNVQINGLNDSNRCDESLNQPGIPERCHPVGDCSLTSSSLDVGRKINLRSVGSS 926

Query: 186  NTPHMGNKDMSQEPSGIDYINYYSFARVASLIAQELMCKSPEKINK 323
             TP M NKD S+ P GIDYINYYSFAR AS +AQELMCKSPEK+NK
Sbjct: 927  ITPSMDNKDTSEVPRGIDYINYYSFARTASFVAQELMCKSPEKMNK 972


>ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800973 [Glycine max]
          Length = 1735

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/106 (71%), Positives = 88/106 (83%)
 Frame = +3

Query: 6    QMRSGIENVQMHRLYDSNRSDESLNQSGIPEKHLPIGDCSLTSSSLDVGRKINLRSVGAS 185
            Q+R+G++NVQ++ L DS+R DESLNQ GIPE+H P+GDCS     LDVGRKINLRSVGAS
Sbjct: 901  QIRTGVDNVQINGLSDSHRCDESLNQPGIPERHHPVGDCS----RLDVGRKINLRSVGAS 956

Query: 186  NTPHMGNKDMSQEPSGIDYINYYSFARVASLIAQELMCKSPEKINK 323
             TP   NKD S+ PSGIDYINYYSFAR AS +AQELMCKSPEK+NK
Sbjct: 957  ITPSTDNKDTSEVPSGIDYINYYSFARTASFVAQELMCKSPEKMNK 1002


>ref|XP_003607305.1| Chromodomain helicase DNA binding protein [Medicago truncatula]
            gi|355508360|gb|AES89502.1| Chromodomain helicase DNA
            binding protein [Medicago truncatula]
          Length = 1573

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/109 (48%), Positives = 60/109 (55%)
 Frame = +3

Query: 3    AQMRSGIENVQMHRLYDSNRSDESLNQSGIPEKHLPIGDCSLTSSSLDVGRKINLRSVGA 182
            AQ+RSGIE++ MHRLYDSNRS                                    +  
Sbjct: 1021 AQLRSGIESIPMHRLYDSNRS------------------------------------IAV 1044

Query: 183  SNTPHMGNKDMSQEPSGIDYINYYSFARVASLIAQELMCKSPEKINKNI 329
            S+T   GN+D SQ   G DYINYYS ARV SL+AQELMCKSPEKINKNI
Sbjct: 1045 SSTA--GNEDTSQASYGTDYINYYSLARVPSLVAQELMCKSPEKINKNI 1091


>emb|CAN78969.1| hypothetical protein VITISV_022739 [Vitis vinifera]
          Length = 1318

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
 Frame = +3

Query: 6    QMRSGIENVQMHRLYDSNRSDESLNQSGIPEKHLPIGDCSLTSSSLDVGRKINLRSV--G 179
            Q+ +GI+N Q H     N S    NQ+  PEK  P+G+CS+ S+S+DV ++  + S   G
Sbjct: 807  QLSTGIQNFQNHGSDCLNTSARISNQAESPEKTPPVGNCSI-STSIDVEQEKKIESAVDG 865

Query: 180  ASNTP-HMGNKDMSQEPSGIDYINYYSFARVASLIAQELMCKSPEK 314
             +++P H   +D+SQ   GIDY NYYSFA+ AS +A+ELM KS +K
Sbjct: 866  HTSSPIHTRKEDVSQVQCGIDYTNYYSFAQTASSVAEELMHKSSDK 911


>ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260139 [Vitis vinifera]
          Length = 1976

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
 Frame = +3

Query: 6    QMRSGIENVQMHRLYDSNRSDESLNQSGIPEKHLPIGDCSLTSSSLDVGRKINLRSV--G 179
            Q  +GI+N Q H     N S    NQ+  PEK  P+G+CS+ S+S+DV ++  + S   G
Sbjct: 823  QSSTGIQNFQNHGSDCLNTSARISNQAESPEKTPPVGNCSI-STSIDVEQEKKIESAVDG 881

Query: 180  ASNTP-HMGNKDMSQEPSGIDYINYYSFARVASLIAQELMCKSPEK 314
             +++P H   +D+SQ   GIDY NYYSFA+ AS +A+ELM KS +K
Sbjct: 882  HTSSPIHTRKEDVSQVQCGIDYTNYYSFAQTASSVAEELMHKSSDK 927


Top