BLASTX nr result

ID: Glycyrrhiza24_contig00032652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032652
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523733.1| PREDICTED: uncharacterized protein LOC100811...   186   1e-45
ref|XP_003527830.1| PREDICTED: uncharacterized protein LOC100813...   179   2e-43
ref|XP_003636452.1| EMBYO FLOWERING 1-like protein [Medicago tru...   149   3e-34
ref|XP_003636398.1| EMBYO FLOWERING 1-like protein [Medicago tru...   149   3e-34
ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_003523733.1| PREDICTED: uncharacterized protein LOC100811989 [Glycine max]
          Length = 1255

 Score =  186 bits (473), Expect = 1e-45
 Identities = 97/132 (73%), Positives = 108/132 (81%), Gaps = 2/132 (1%)
 Frame = -1

Query: 390 PSPKNYPGLAQEVRPTKIGCAGDEVSCVQLASNLKCMDKSSADICNGGTPSADNQCQKDL 211
           PSPKNY  LA EV  TK G  G+EVS  +LASNLKCM+K+SA++CNGGTP ADNQCQKDL
Sbjct: 255 PSPKNYTDLAPEVHTTKKG-EGNEVSFPELASNLKCMEKNSAEMCNGGTP-ADNQCQKDL 312

Query: 210 VKACTILGEGAAVMEPDNTCT--TGHPIESVACNHAVAAGSVDNMVENDFQDHHSEKSTG 37
           +KACT+LG+G  VME DNT    TG  +E VACN+A  AGSVDN VENDFQDHHSEKSTG
Sbjct: 313 IKACTVLGKGTTVMEVDNTDDHPTGPSLEPVACNNAAPAGSVDNTVENDFQDHHSEKSTG 372

Query: 36  LSRRRPRKVRLM 1
           LSRRRPRKVRLM
Sbjct: 373 LSRRRPRKVRLM 384


>ref|XP_003527830.1| PREDICTED: uncharacterized protein LOC100813480 [Glycine max]
          Length = 995

 Score =  179 bits (455), Expect = 2e-43
 Identities = 93/132 (70%), Positives = 106/132 (80%), Gaps = 2/132 (1%)
 Frame = -1

Query: 390 PSPKNYPGLAQEVRPTKIGCAGDEVSCVQLASNLKCMDKSSADICNGGTPSADNQCQKDL 211
           PSPKNYP LA EV   K G  G+EVS  +LASNLKC+ K+SA++CNGGTP ADNQCQKDL
Sbjct: 177 PSPKNYPDLAPEVHTIKKG-EGNEVSFPELASNLKCLGKNSAEMCNGGTP-ADNQCQKDL 234

Query: 210 VKACTILGEGAAVMEPDNTCT--TGHPIESVACNHAVAAGSVDNMVENDFQDHHSEKSTG 37
           +KACT+ G+   V+E DNT    TG P+ESVACN+A  AGSVDN VENDFQDHHSEKS G
Sbjct: 235 IKACTVWGKVTTVIEVDNTDNHPTGPPLESVACNNAAPAGSVDNTVENDFQDHHSEKSLG 294

Query: 36  LSRRRPRKVRLM 1
           L+RRRPRKVRLM
Sbjct: 295 LTRRRPRKVRLM 306


>ref|XP_003636452.1| EMBYO FLOWERING 1-like protein [Medicago truncatula]
           gi|355502387|gb|AES83590.1| EMBYO FLOWERING 1-like
           protein [Medicago truncatula]
          Length = 1149

 Score =  149 bits (375), Expect = 3e-34
 Identities = 85/132 (64%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
 Frame = -1

Query: 390 PSPKNYPGLAQEVRPTKIGCAGDEVSCVQLASNL--KCMDKSSADICNGGTPSADNQCQK 217
           PSPK YP  AQEV  TK G   + VS VQLA NL  KC  K+SA+ICNGGTP ADNQC+K
Sbjct: 189 PSPKIYPDFAQEVSTTKRGGESNGVSYVQLAKNLRLKCTGKNSAEICNGGTP-ADNQCRK 247

Query: 216 DLVKACTILGEGAAVMEPDNTCTTGHPIESVACNHAVAAGSVDNMVENDFQDHHSEKSTG 37
           DLV   T      A  + D+T  TG PIES ACN++V A S DNMV++DFQDHHSEKSTG
Sbjct: 248 DLVTTAT-----EAYNKYDHT--TGPPIESFACNNSVPAVSTDNMVDDDFQDHHSEKSTG 300

Query: 36  LSRRRPRKVRLM 1
           LSRR+PRKVRLM
Sbjct: 301 LSRRKPRKVRLM 312


>ref|XP_003636398.1| EMBYO FLOWERING 1-like protein [Medicago truncatula]
           gi|355502333|gb|AES83536.1| EMBYO FLOWERING 1-like
           protein [Medicago truncatula]
          Length = 1178

 Score =  149 bits (375), Expect = 3e-34
 Identities = 85/132 (64%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
 Frame = -1

Query: 390 PSPKNYPGLAQEVRPTKIGCAGDEVSCVQLASNL--KCMDKSSADICNGGTPSADNQCQK 217
           PSPK YP  AQEV  TK G   + VS VQLA NL  KC  K+SA+ICNGGTP ADNQC+K
Sbjct: 189 PSPKIYPDFAQEVSTTKRGGESNGVSYVQLAKNLRLKCTGKNSAEICNGGTP-ADNQCRK 247

Query: 216 DLVKACTILGEGAAVMEPDNTCTTGHPIESVACNHAVAAGSVDNMVENDFQDHHSEKSTG 37
           DLV   T      A  + D+T  TG PIES ACN++V A S DNMV++DFQDHHSEKSTG
Sbjct: 248 DLVTTAT-----EAYNKYDHT--TGPPIESFACNNSVPAVSTDNMVDDDFQDHHSEKSTG 300

Query: 36  LSRRRPRKVRLM 1
           LSRR+PRKVRLM
Sbjct: 301 LSRRKPRKVRLM 312


>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
           predicted protein [Populus trichocarpa]
          Length = 1309

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
 Frame = -1

Query: 336 GCAGDEVSCVQLASNLKCMDKSSADICNGGTP-SADNQCQKDLVKACT----ILGEGAAV 172
           GC   EV   + A NL CM  ++ +IC  G   S D+Q ++ + +  +     + +GA  
Sbjct: 246 GCGHHEVVAAEFARNLNCMVNNATEICEAGKETSIDDQYKEIITRGASGEAGNIDDGALT 305

Query: 171 MEPDNTCTTGHPIESVACNHAVAAGSVDNMVENDFQDHHSEKSTGLSRRRPRKVRLM 1
            + D        ++        ++ S D MV N+ QD H E S+GL RR+ RKVRL+
Sbjct: 306 ADKDPVSRPSLELDEY---DDPSSESTDIMVGNNSQDVHHENSSGLHRRKTRKVRLL 359


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