BLASTX nr result
ID: Glycyrrhiza24_contig00032648
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00032648
(367 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-52
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi... 196 1e-48
ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi... 143 2e-32
emb|CBI23204.3| unnamed protein product [Vitis vinifera] 143 2e-32
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi... 132 2e-29
>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 209 bits (532), Expect = 2e-52
Identities = 102/121 (84%), Positives = 112/121 (92%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
DLVSWNSL+S YAQ G +CEVLLL+KTMR+QG EPDPQTFGSVLSVAASRG++KLGR +H
Sbjct: 232 DLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLH 291
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENAD 6
GQILR C DLDAHVETSLIVMYLKGGNI++AFRMFERS DKDVVLWTAMISGLVQN +AD
Sbjct: 292 GQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSAD 351
Query: 5 K 3
K
Sbjct: 352 K 352
Score = 83.2 bits (204), Expect = 2e-14
Identities = 43/112 (38%), Positives = 67/112 (59%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
+LVSWN++++ YAQ G +C+ L L MR PD T S+L AS G + LG+ +H
Sbjct: 434 NLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIH 493
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISG 30
++R + V+TSL+ MY K G++++A R F + D+V W+A+I G
Sbjct: 494 SFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVG 545
Score = 74.7 bits (182), Expect = 7e-12
Identities = 36/116 (31%), Positives = 65/116 (56%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D+V W +++S Q G + L + + M G++ T SV++ A G LG SVH
Sbjct: 333 DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVH 392
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQN 18
G + R + +D + SL+ M+ K G+++ + +F++ + +++V W AMI+G QN
Sbjct: 393 GYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQN 448
Score = 61.2 bits (147), Expect = 8e-08
Identities = 35/107 (32%), Positives = 63/107 (58%)
Frame = -3
Query: 356 SWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVHGQI 177
S+N++++ ++ G +VL +M + D TF S+L +S LG S+H +I
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 176 LRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMI 36
L + + LDA++ +SLI Y K G +VA ++F+ +++VV WT++I
Sbjct: 96 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSII 142
Score = 59.3 bits (142), Expect = 3e-07
Identities = 32/115 (27%), Positives = 61/115 (53%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
++V W S++ Y++TG + E L MR QG++P T +LS+ ++ + +H
Sbjct: 134 NVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT---MLSLLFGVSELAHVQCLH 190
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQ 21
G + D ++ S++ MY K NIE + ++F+ +D+V W +++S Q
Sbjct: 191 GSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQ 245
>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 196 bits (499), Expect = 1e-48
Identities = 98/121 (80%), Positives = 110/121 (90%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
DLVSWNSL+S YAQ G++CEVLLL+KTMR+QG E PQTFGSVLSVAASRG++KLGR +H
Sbjct: 224 DLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLH 283
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENAD 6
GQILRA LDAHVETSLIV+YLKGG I++AFRMFERSSDKDVVLWTAMISGLVQN +AD
Sbjct: 284 GQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSAD 343
Query: 5 K 3
K
Sbjct: 344 K 344
Score = 85.9 bits (211), Expect = 3e-15
Identities = 45/112 (40%), Positives = 66/112 (58%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
DLVSWN++++ YAQ G +CE L L MR PD T S+L AS G + LG+ +H
Sbjct: 426 DLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIH 485
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISG 30
++R + V+TSL+ MY K G+++ A R F + D+V W+A+I G
Sbjct: 486 SFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVG 537
Score = 79.3 bits (194), Expect = 3e-13
Identities = 39/116 (33%), Positives = 65/116 (56%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D+V W +++S Q G + L + + M G++P T SV++ A G LG S+
Sbjct: 325 DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSIL 384
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQN 18
G ILR + LD + SL+ MY K G+++ + +F+ + +D+V W AM++G QN
Sbjct: 385 GYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQN 440
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/118 (28%), Positives = 63/118 (53%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
++V W +++ Y++TG + E L MR QG++P T VLS+ ++ + +H
Sbjct: 126 NVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT---VLSLLFGVSELAHVQCLH 182
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNEN 12
G + D ++ S++ +Y K GNIE + ++F+ +D+V W ++IS Q N
Sbjct: 183 GCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGN 240
Score = 54.7 bits (130), Expect = 8e-06
Identities = 33/107 (30%), Positives = 59/107 (55%)
Frame = -3
Query: 356 SWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVHGQI 177
S N+ ++ ++ G +VL +M + D TF S+L + LG ++H +I
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 176 LRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMI 36
L + + LDA++ +SLI Y K G +VA ++F+ +++VV WT +I
Sbjct: 88 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTII 134
>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 143 bits (360), Expect = 2e-32
Identities = 70/120 (58%), Positives = 92/120 (76%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D++SWNSL+S YAQ G++ EVL L+ M+ G+EPD QTFGS++S AA + + +G+ VH
Sbjct: 211 DVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVH 270
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENAD 6
G ILRA ++ D+H+ETSLI MYLK GN+ AFR+FE KDV+ WTAMISGLVQN+ AD
Sbjct: 271 GHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCAD 330
Score = 84.0 bits (206), Expect = 1e-14
Identities = 41/112 (36%), Positives = 69/112 (61%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D+VSWN+++S +AQ G LC+ LLL MR PD T S+L AS G + G+ +H
Sbjct: 413 DIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIH 472
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISG 30
+ ++C+ ++T+L+ MY K G++ A + F+R +D+V W+++I+G
Sbjct: 473 NFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAG 524
Score = 82.4 bits (202), Expect = 3e-14
Identities = 42/116 (36%), Positives = 64/116 (55%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D++SW +++S Q + + + M + P T SVL+ A G LG SVH
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQN 18
G ILR + LD + SL+ MY K G++E + +F+R S +D+V W A++SG QN
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQN 427
Score = 63.5 bits (153), Expect = 2e-08
Identities = 34/107 (31%), Positives = 57/107 (53%)
Frame = -3
Query: 356 SWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVHGQI 177
S+N++++ + G C+VLL +M PD TF S++ S G S H ++
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 176 LRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMI 36
+ D+++ TSLI Y K G+ + A ++F+ D++VV WT MI
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMI 121
Score = 57.8 bits (138), Expect = 9e-07
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
++V W +++ Y + G+ + MR QG++P T +LS G ++L VH
Sbjct: 113 NVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS-----GVLEL---VH 164
Query: 185 GQILRACV-----DLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQ 21
Q L ACV D + S++ +Y K G +E A +FE +DV+ W +++SG Q
Sbjct: 165 LQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQ 224
Query: 20 NEN 12
N
Sbjct: 225 LGN 227
>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 143 bits (360), Expect = 2e-32
Identities = 70/120 (58%), Positives = 92/120 (76%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D++SWNSL+S YAQ G++ EVL L+ M+ G+EPD QTFGS++S AA + + +G+ VH
Sbjct: 211 DVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVH 270
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENAD 6
G ILRA ++ D+H+ETSLI MYLK GN+ AFR+FE KDV+ WTAMISGLVQN+ AD
Sbjct: 271 GHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCAD 330
Score = 84.0 bits (206), Expect = 1e-14
Identities = 41/112 (36%), Positives = 69/112 (61%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D+VSWN+++S +AQ G LC+ LLL MR PD T S+L AS G + G+ +H
Sbjct: 413 DIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIH 472
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISG 30
+ ++C+ ++T+L+ MY K G++ A + F+R +D+V W+++I+G
Sbjct: 473 NFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAG 524
Score = 82.4 bits (202), Expect = 3e-14
Identities = 42/116 (36%), Positives = 64/116 (55%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D++SW +++S Q + + + M + P T SVL+ A G LG SVH
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQN 18
G ILR + LD + SL+ MY K G++E + +F+R S +D+V W A++SG QN
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQN 427
Score = 63.5 bits (153), Expect = 2e-08
Identities = 34/107 (31%), Positives = 57/107 (53%)
Frame = -3
Query: 356 SWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVHGQI 177
S+N++++ + G C+VLL +M PD TF S++ S G S H ++
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 176 LRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMI 36
+ D+++ TSLI Y K G+ + A ++F+ D++VV WT MI
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMI 121
Score = 57.8 bits (138), Expect = 9e-07
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
++V W +++ Y + G+ + MR QG++P T +LS G ++L VH
Sbjct: 113 NVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS-----GVLEL---VH 164
Query: 185 GQILRACV-----DLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQ 21
Q L ACV D + S++ +Y K G +E A +FE +DV+ W +++SG Q
Sbjct: 165 LQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQ 224
Query: 20 NEN 12
N
Sbjct: 225 LGN 227
>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 132 bits (333), Expect = 2e-29
Identities = 60/121 (49%), Positives = 97/121 (80%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D+VSWNSLLS Y++ G E+L L++ M+++ ++PD QTF S LS +A +GD++LG+ VH
Sbjct: 212 DIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVH 271
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENAD 6
G +L+ +++D HVE++L+V+YL+ ++ A+++F+ +++KDVV+WTAMISGLVQN+ AD
Sbjct: 272 GLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCAD 331
Query: 5 K 3
K
Sbjct: 332 K 332
Score = 73.6 bits (179), Expect = 2e-11
Identities = 39/112 (34%), Positives = 63/112 (56%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
DLVSWN++++ +A+ G L + + MR L PD T S+L S G + G+ +H
Sbjct: 414 DLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIH 473
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISG 30
+LR+ + ET+L+ MY K GN+E A + F+ +D+V W+ +I G
Sbjct: 474 NFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVG 525
Score = 67.4 bits (163), Expect = 1e-09
Identities = 34/116 (29%), Positives = 60/116 (51%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
D+V W +++S Q + L + M ++P T S L+ A G +G S+H
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQN 18
G +LR + LD + SL+ MY K ++ + +F + +KD+V W A+++G +N
Sbjct: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKN 428
Score = 54.3 bits (129), Expect = 1e-05
Identities = 31/111 (27%), Positives = 58/111 (52%)
Frame = -3
Query: 365 DLVSWNSLLSTYAQTGDLCEVLLLVKTMRVQGLEPDPQTFGSVLSVAASRGDMKLGRSVH 186
++V W +++ +Y++ GD+ + K MR G++P T +LS+ + L +H
Sbjct: 114 NVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVT---LLSLLPGISKLPLLLCLH 170
Query: 185 GQILRACVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMIS 33
I+ + D + S++ MY K G I A R+FE +D+V W +++S
Sbjct: 171 CLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLS 221