BLASTX nr result

ID: Glycyrrhiza24_contig00032647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032647
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   164   9e-39
ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   161   6e-38
ref|XP_003592391.1| DEAD-box ATP-dependent RNA helicase [Medicag...   160   8e-38
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]                 158   5e-37
ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putativ...   155   3e-36

>ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 693

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/101 (82%), Positives = 90/101 (89%)
 Frame = -2

Query: 303 YIHRSGRTGRAGNTGVAVMLYDPRRSSVSKIERESGVKFEHVSAPQPDDIAKAVGGEAAE 124
           YIHRSGRTGRAGNTGVAVMLYDP+RS++S+IERESGVKFEHVSAPQPDDIAKAV GEAAE
Sbjct: 447 YIHRSGRTGRAGNTGVAVMLYDPKRSNISRIERESGVKFEHVSAPQPDDIAKAVSGEAAE 506

Query: 123 MITQVSDSVIPAFKSAAEELLNNSGLSVVEXXXXXXXXAVG 1
           MI QVSDSV+PAFKSAAE+LLNNSGL V+E        AVG
Sbjct: 507 MIIQVSDSVVPAFKSAAEDLLNNSGLPVIELLAKALAKAVG 547


>ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 697

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/101 (81%), Positives = 89/101 (88%)
 Frame = -2

Query: 303 YIHRSGRTGRAGNTGVAVMLYDPRRSSVSKIERESGVKFEHVSAPQPDDIAKAVGGEAAE 124
           YIHRSGRTGRAGNTGVAVMLYDP+RS++ +IERESGVKFEHVSAPQPDDIAKAV GEAAE
Sbjct: 452 YIHRSGRTGRAGNTGVAVMLYDPKRSNIPRIERESGVKFEHVSAPQPDDIAKAVSGEAAE 511

Query: 123 MITQVSDSVIPAFKSAAEELLNNSGLSVVEXXXXXXXXAVG 1
           MI QVSDSV+PAFKSAAEELLN+SGL V+E        AVG
Sbjct: 512 MIIQVSDSVVPAFKSAAEELLNSSGLPVIELLAKALAKAVG 552


>ref|XP_003592391.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355481439|gb|AES62642.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 641

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/101 (83%), Positives = 89/101 (88%)
 Frame = -2

Query: 303 YIHRSGRTGRAGNTGVAVMLYDPRRSSVSKIERESGVKFEHVSAPQPDDIAKAVGGEAAE 124
           YIHRSGRTGRAGNTGVAVMLYDPRRS++ KIERESGVKFEH+SAPQ +DIAKAVG EAAE
Sbjct: 393 YIHRSGRTGRAGNTGVAVMLYDPRRSNIPKIERESGVKFEHISAPQANDIAKAVGREAAE 452

Query: 123 MITQVSDSVIPAFKSAAEELLNNSGLSVVEXXXXXXXXAVG 1
           MI QVSDSVIPAFKSAAEELLNNSGLSVV+        AVG
Sbjct: 453 MIMQVSDSVIPAFKSAAEELLNNSGLSVVDLFAKALAKAVG 493


>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
          Length = 713

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/101 (80%), Positives = 88/101 (87%)
 Frame = -2

Query: 303 YIHRSGRTGRAGNTGVAVMLYDPRRSSVSKIERESGVKFEHVSAPQPDDIAKAVGGEAAE 124
           YIHRSGRTGRAGNTGVA  LYDP+RS++SKIERESGVKFEH+SAP+PDDIAKAVGGEAAE
Sbjct: 463 YIHRSGRTGRAGNTGVAGTLYDPKRSNISKIERESGVKFEHISAPRPDDIAKAVGGEAAE 522

Query: 123 MITQVSDSVIPAFKSAAEELLNNSGLSVVEXXXXXXXXAVG 1
           MITQVSDSVIPAFK  AEELL +SGL+VVE        AVG
Sbjct: 523 MITQVSDSVIPAFKETAEELLKSSGLTVVELLAKALAKAVG 563


>ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223550005|gb|EEF51492.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 690

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/90 (84%), Positives = 85/90 (94%)
 Frame = -2

Query: 303 YIHRSGRTGRAGNTGVAVMLYDPRRSSVSKIERESGVKFEHVSAPQPDDIAKAVGGEAAE 124
           YIHRSGRTGRAGNTGVAVMLYDPRRS++SKIERESGVKFEH++APQP DIA+AVG  AAE
Sbjct: 439 YIHRSGRTGRAGNTGVAVMLYDPRRSNISKIERESGVKFEHITAPQPADIAQAVGAVAAE 498

Query: 123 MITQVSDSVIPAFKSAAEELLNNSGLSVVE 34
            ITQVSDS++PAFKSAAE+LLN+SGLS VE
Sbjct: 499 KITQVSDSIVPAFKSAAEDLLNSSGLSAVE 528


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