BLASTX nr result

ID: Glycyrrhiza24_contig00032644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032644
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237917.1| uncharacterized protein LOC100527819 [Glycin...    74   1e-11
gb|ACJ84171.1| unknown [Medicago truncatula] gi|388521121|gb|AFK...    71   1e-10
ref|XP_002267997.1| PREDICTED: vesicle transport protein SFT2B [...    67   2e-09
ref|XP_002318402.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CAN69293.1| hypothetical protein VITISV_028882 [Vitis vinifera]    67   2e-09

>ref|NP_001237917.1| uncharacterized protein LOC100527819 [Glycine max]
           gi|255633298|gb|ACU17006.1| unknown [Glycine max]
          Length = 161

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/67 (56%), Positives = 44/67 (65%)
 Frame = -3

Query: 203 MWKISQSLSGDNXXXXXXXXXXXXXXXXXXSPTQRIYGFAAAFIAGLACMLLSMIVFAKP 24
           MW I+++L+GDN                  S TQRIYGFA+  +AGLACMLLSMIVFAKP
Sbjct: 1   MWNIARTLTGDNEDQEEGLLGEDSGGLCSLSTTQRIYGFASCLVAGLACMLLSMIVFAKP 60

Query: 23  IKFAVLF 3
           IKFA LF
Sbjct: 61  IKFAALF 67


>gb|ACJ84171.1| unknown [Medicago truncatula] gi|388521121|gb|AFK48622.1| unknown
           [Medicago truncatula]
          Length = 162

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/68 (58%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 203 MWK-ISQSLSGDNXXXXXXXXXXXXXXXXXXSPTQRIYGFAAAFIAGLACMLLSMIVFAK 27
           MWK + +SLSGDN                  + TQR+YGFAA  IAGLA MLLSMIVFAK
Sbjct: 1   MWKKLGESLSGDNEEQEESLLGEGSGGLSSLTTTQRMYGFAACLIAGLALMLLSMIVFAK 60

Query: 26  PIKFAVLF 3
           PIKFAVLF
Sbjct: 61  PIKFAVLF 68


>ref|XP_002267997.1| PREDICTED: vesicle transport protein SFT2B [Vitis vinifera]
           gi|302144038|emb|CBI23143.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/67 (52%), Positives = 40/67 (59%)
 Frame = -3

Query: 203 MWKISQSLSGDNXXXXXXXXXXXXXXXXXXSPTQRIYGFAAAFIAGLACMLLSMIVFAKP 24
           MW + QS+ G N                   P QR+YGFAA  +AG ACMLLS+IVFAKP
Sbjct: 1   MWNLGQSILGGNEEDREEYLEDSDGLCNLS-PVQRMYGFAACLVAGFACMLLSLIVFAKP 59

Query: 23  IKFAVLF 3
           IKFAVLF
Sbjct: 60  IKFAVLF 66


>ref|XP_002318402.1| predicted protein [Populus trichocarpa] gi|222859075|gb|EEE96622.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/67 (50%), Positives = 43/67 (64%)
 Frame = -3

Query: 203 MWKISQSLSGDNXXXXXXXXXXXXXXXXXXSPTQRIYGFAAAFIAGLACMLLSMIVFAKP 24
           MWK++  LSGD+                  SPTQR+Y FAA+ +AGLA M LS+IVFAKP
Sbjct: 1   MWKLNHFLSGDDEEREESFLEEESDGLCSLSPTQRMYAFAASLVAGLALMFLSLIVFAKP 60

Query: 23  IKFAVLF 3
           IK+A+LF
Sbjct: 61  IKYALLF 67


>emb|CAN69293.1| hypothetical protein VITISV_028882 [Vitis vinifera]
          Length = 183

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/67 (53%), Positives = 41/67 (61%)
 Frame = -3

Query: 203 MWKISQSLSGDNXXXXXXXXXXXXXXXXXXSPTQRIYGFAAAFIAGLACMLLSMIVFAKP 24
           MW + QS+ G N                   P QR+YGFAA  +AG ACMLLS+IVFAKP
Sbjct: 1   MWNLGQSILGGNEEDREEXLEDSDGLCNLS-PVQRMYGFAACLVAGFACMLLSLIVFAKP 59

Query: 23  IKFAVLF 3
           IKFAVLF
Sbjct: 60  IKFAVLF 66


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