BLASTX nr result

ID: Glycyrrhiza24_contig00032643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032643
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547271.1| PREDICTED: ubiquitin fusion degradation prot...   171   4e-41
ref|XP_002299862.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
gb|ABK94471.1| unknown [Populus trichocarpa]                          169   2e-40
ref|XP_003537987.1| PREDICTED: ubiquitin fusion degradation prot...   168   4e-40
ref|XP_002306140.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39

>ref|XP_003547271.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
           max]
          Length = 318

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/95 (83%), Positives = 88/95 (92%)
 Frame = -1

Query: 285 VSHCGVLEFTSDEGIIYIPNWMMENMRLQEGDIVILRNTSLPEGNFVKLQPHTKDFLDIS 106
           V+HCGVLEF SDEGIIYIP WMMENM LQEGDIV ++NT+L +G +VKLQPHTKDFLDIS
Sbjct: 66  VTHCGVLEFVSDEGIIYIPYWMMENMLLQEGDIVKVKNTNLAKGTYVKLQPHTKDFLDIS 125

Query: 105 NPKAILEITLRNYSCLTTGDTIMIPYNNKKYYIDV 1
           NPKAILE TLR+YSCLTTGDTIM+PYNNKKYYID+
Sbjct: 126 NPKAILETTLRSYSCLTTGDTIMVPYNNKKYYIDI 160


>ref|XP_002299862.1| predicted protein [Populus trichocarpa] gi|222847120|gb|EEE84667.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/94 (84%), Positives = 86/94 (91%)
 Frame = -1

Query: 282 SHCGVLEFTSDEGIIYIPNWMMENMRLQEGDIVILRNTSLPEGNFVKLQPHTKDFLDISN 103
           SHCGVLEF +DEG+IY+P WMMENM LQEGDIV LRNTSL +G FVKLQPHTKDFLDISN
Sbjct: 61  SHCGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISN 120

Query: 102 PKAILEITLRNYSCLTTGDTIMIPYNNKKYYIDV 1
           PKAILE +LRNYSCLTTGDTIM+ YNNKKYYID+
Sbjct: 121 PKAILETSLRNYSCLTTGDTIMVAYNNKKYYIDI 154


>gb|ABK94471.1| unknown [Populus trichocarpa]
          Length = 314

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/94 (84%), Positives = 86/94 (91%)
 Frame = -1

Query: 282 SHCGVLEFTSDEGIIYIPNWMMENMRLQEGDIVILRNTSLPEGNFVKLQPHTKDFLDISN 103
           SHCGVLEF +DEG+IY+P WMMENM LQEGDIV LRNTSL +G FVKLQPHTKDFLDISN
Sbjct: 66  SHCGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISN 125

Query: 102 PKAILEITLRNYSCLTTGDTIMIPYNNKKYYIDV 1
           PKAILE +LRNYSCLTTGDTIM+ YNNKKYYID+
Sbjct: 126 PKAILETSLRNYSCLTTGDTIMVAYNNKKYYIDI 159


>ref|XP_003537987.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
           max]
          Length = 338

 Score =  168 bits (426), Expect = 4e-40
 Identities = 75/95 (78%), Positives = 89/95 (93%)
 Frame = -1

Query: 285 VSHCGVLEFTSDEGIIYIPNWMMENMRLQEGDIVILRNTSLPEGNFVKLQPHTKDFLDIS 106
           V+HCGVLEFT+DEGII++P WMM+NM+LQEG+ VIL+NT +P   +VKLQPHTKDFLDIS
Sbjct: 87  VTHCGVLEFTADEGIIHMPEWMMKNMKLQEGNTVILKNTQVPRATYVKLQPHTKDFLDIS 146

Query: 105 NPKAILEITLRNYSCLTTGDTIMIPYNNKKYYIDV 1
           NPK+ILEI+LR+YSCLTTGDTIMIPYNNKKYYID+
Sbjct: 147 NPKSILEISLRSYSCLTTGDTIMIPYNNKKYYIDI 181


>ref|XP_002306140.1| predicted protein [Populus trichocarpa] gi|222849104|gb|EEE86651.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  164 bits (416), Expect = 5e-39
 Identities = 74/95 (77%), Positives = 87/95 (91%)
 Frame = -1

Query: 285 VSHCGVLEFTSDEGIIYIPNWMMENMRLQEGDIVILRNTSLPEGNFVKLQPHTKDFLDIS 106
           VSHCGVLEF ++EG+IY+P WMMEN+ LQEGDIV ++N +LP+G +VKLQPHTKDFLDIS
Sbjct: 30  VSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGKYVKLQPHTKDFLDIS 89

Query: 105 NPKAILEITLRNYSCLTTGDTIMIPYNNKKYYIDV 1
           NPKAILE TLRNYSCLTTGD+IM+ YNNKKYYID+
Sbjct: 90  NPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDI 124