BLASTX nr result

ID: Glycyrrhiza24_contig00032634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032634
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...   152   2e-35
ref|XP_003591356.1| Pentatricopeptide repeat-containing protein ...   149   2e-34
ref|XP_003536858.1| PREDICTED: putative pentatricopeptide repeat...   143   1e-32
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   132   2e-29
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...   127   9e-28

>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/87 (85%), Positives = 82/87 (94%)
 Frame = +1

Query: 1   EKGFGSYTLVSDVLFDLLCDMGKLREAEKCFLEMIEKGQKPSNVSFKRIKVLMELANRHE 180
           EKGFGSYTLVSDVLFDLLCDMGKL EAEKCFLEM+EKGQKPS+VSF+RIKVLMELANRHE
Sbjct: 405 EKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLMELANRHE 464

Query: 181 ALQNLMEKLAMFRRPLQVHESTESPTE 261
           ALQ+LM+K+AMF RPLQV +ST +P E
Sbjct: 465 ALQSLMQKMAMFGRPLQVDQSTVNPAE 491


>ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480404|gb|AES61607.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = +1

Query: 1   EKGFGSYTLVSDVLFDLLCDMGKLREAEKCFLEMIEKGQKPSNVSFKRIKVLMELANRHE 180
           EKGFGSYTLVSDVLFD+LCDMGKL EAEKCFLEMIEKGQ+PSNVSFKRIKVLMELAN+HE
Sbjct: 399 EKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRIKVLMELANKHE 458

Query: 181 ALQNLMEKLAMFRRPLQVHESTESP 255
           A+QNL +K+A+F RPLQVHE   +P
Sbjct: 459 AIQNLTQKMAIFGRPLQVHERVATP 483


>ref|XP_003536858.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 279

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/78 (88%), Positives = 76/78 (97%)
 Frame = +1

Query: 1   EKGFGSYTLVSDVLFDLLCDMGKLREAEKCFLEMIEKGQKPSNVSFKRIKVLMELANRHE 180
           EKGFGSYTLVSDVLFDLLCDMGKL EAEKCFLEM+EKGQKPS+VSF+RIKVLMELANRHE
Sbjct: 201 EKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLMELANRHE 260

Query: 181 ALQNLMEKLAMFRRPLQV 234
           ALQ+L +K+A+FRRPLQV
Sbjct: 261 ALQSLTQKMAIFRRPLQV 278


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/88 (75%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   EKGFGSYTLVSDVLFDLLCDMGKLREAEKCFLEMIEKGQKPSNVSFKRIKVLMELANRHE 180
           EKGFGSY LVSDVLFD+LCDMGKL E EKC L+MIEKG KPSNVSF+RIKVLMELAN+HE
Sbjct: 431 EKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPSNVSFRRIKVLMELANKHE 490

Query: 181 ALQNLMEKLAMFRRPLQVHESTESPTEL 264
           ALQNL EK+AMF    QV E  E+  E+
Sbjct: 491 ALQNLTEKMAMFGPSTQVQERAENMVEI 518


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/87 (72%), Positives = 72/87 (82%)
 Frame = +1

Query: 1   EKGFGSYTLVSDVLFDLLCDMGKLREAEKCFLEMIEKGQKPSNVSFKRIKVLMELANRHE 180
           EKGFGSY LVSDVLFDLLCDMGKL EAEKCFL+MIEKG KPSNVSF+RIKVLMEL N+H+
Sbjct: 410 EKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSFRRIKVLMELVNKHD 469

Query: 181 ALQNLMEKLAMFRRPLQVHESTESPTE 261
           AL NL +K+A+F   +Q+ E  E   E
Sbjct: 470 ALLNLQKKMAIFGSSIQLPEREEHLNE 496


Top