BLASTX nr result

ID: Glycyrrhiza24_contig00032631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032631
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ...   149   2e-34
ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
emb|CBI26593.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15

>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519010|gb|AET00634.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/101 (75%), Positives = 80/101 (79%)
 Frame = -1

Query: 305 ISALESLLQFHAVTVTTGNSSNPFIAAKLISLYDTLNXXXXXXXXXXXXXSKDTFLWNSL 126
           I+ L+SLL FHAVTVTTGNS+NPFIAAKLISLYDTLN              KDTFLWNS 
Sbjct: 21  ITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSF 80

Query: 125 LKTLFSRSLYPQVLSFYSLMRSSNVLPNHFTLPMVASASAH 3
           LKTLFSRSLYPQ LSFYSLMRS NVLPNHFT PMVAS+ AH
Sbjct: 81  LKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAH 121


>ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Glycine max]
          Length = 750

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/102 (59%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
 Frame = -1

Query: 305 ISALESLLQFHAVTVTTGNSSNPFIAAKLISLYDTLNXXXXXXXXXXXXXS-KDTFLWNS 129
           I  L+SLL+FHA+TVT+G+S+N F+A+KLISLYD+LN               KDTFL+NS
Sbjct: 17  IRTLDSLLRFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLPSKDTFLYNS 76

Query: 128 LLKTLFSRSLYPQVLSFYSLMRSSNVLPNHFTLPMVASASAH 3
            LK+LFSRSL+P+VLS +S MR+SN+ PNHFTLP+V SA+AH
Sbjct: 77  FLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAH 118


>emb|CBI26593.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/100 (46%), Positives = 64/100 (64%)
 Frame = -1

Query: 305 ISALESLLQFHAVTVTTGNSSNPFIAAKLISLYDTLNXXXXXXXXXXXXXSKDTFLWNSL 126
           IS+L++LLQ HA  +T+G S+N FIA+KLISLY + +              +D FLWNS+
Sbjct: 45  ISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSI 104

Query: 125 LKTLFSRSLYPQVLSFYSLMRSSNVLPNHFTLPMVASASA 6
           +K  FS   Y + L FY  MR+S  LPNHFT+PM+ ++ A
Sbjct: 105 IKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCA 144


>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/100 (46%), Positives = 64/100 (64%)
 Frame = -1

Query: 305 ISALESLLQFHAVTVTTGNSSNPFIAAKLISLYDTLNXXXXXXXXXXXXXSKDTFLWNSL 126
           IS+L++LLQ HA  +T+G S+N FIA+KLISLY + +              +D FLWNS+
Sbjct: 45  ISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSI 104

Query: 125 LKTLFSRSLYPQVLSFYSLMRSSNVLPNHFTLPMVASASA 6
           +K  FS   Y + L FY  MR+S  LPNHFT+PM+ ++ A
Sbjct: 105 IKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCA 144


>ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/101 (43%), Positives = 59/101 (58%)
 Frame = -1

Query: 308 PISALESLLQFHAVTVTTGNSSNPFIAAKLISLYDTLNXXXXXXXXXXXXXSKDTFLWNS 129
           P    +SLLQFH++ +TTGNS+N F A KL++ Y                 SKD FLWNS
Sbjct: 49  PNLTFQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNS 108

Query: 128 LLKTLFSRSLYPQVLSFYSLMRSSNVLPNHFTLPMVASASA 6
           ++++ FS   Y +   FY  MR+S+ LPN FT+PMV S  A
Sbjct: 109 IIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCA 149


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