BLASTX nr result

ID: Glycyrrhiza24_contig00032630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032630
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237361.1| chloroplast omega 3 fatty acid desaturase is...   184   7e-45
ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44
ref|NP_001239777.1| omega-3 fatty acid desaturase, chloroplastic...   181   7e-44
ref|NP_001238609.1| fatty acid desaturase 8 [Glycine max] gi|213...   181   7e-44
gb|ABU96743.1| chloroplast omega-3 fatty acid desaturase [Jatrop...   181   7e-44

>ref|NP_001237361.1| chloroplast omega 3 fatty acid desaturase isoform 2 [Glycine max]
           gi|229914956|gb|ACF19424.1| chloroplast omega 3 fatty
           acid desaturase isoform 2 [Glycine max]
          Length = 453

 Score =  184 bits (467), Expect = 7e-45
 Identities = 82/88 (93%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERLFRSLDSVTRTLRFTAPFPLLA 181
           LHSSILVPYHGWRISHRTHHQ+HGHVENDESWHPLPE+LFRSLD+VTR LRFTAPFPLLA
Sbjct: 193 LHSSILVPYHGWRISHRTHHQHHGHVENDESWHPLPEKLFRSLDTVTRMLRFTAPFPLLA 252

Query: 182 YPVYLWSRSPGKTGSHFHPSSDLFVPNE 265
           YPVYLW RSPGKTGSHF PSSDLFVPNE
Sbjct: 253 YPVYLWGRSPGKTGSHFDPSSDLFVPNE 280


>ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|222851983|gb|EEE89530.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  181 bits (460), Expect = 4e-44
 Identities = 78/88 (88%), Positives = 84/88 (95%)
 Frame = +2

Query: 2   LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERLFRSLDSVTRTLRFTAPFPLLA 181
           LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPE+++RSLD+VTR LRFT PFP+LA
Sbjct: 191 LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIYRSLDNVTRKLRFTLPFPMLA 250

Query: 182 YPVYLWSRSPGKTGSHFHPSSDLFVPNE 265
           YPVYLW+RSPGK GSHFHP SDLFVPNE
Sbjct: 251 YPVYLWNRSPGKKGSHFHPDSDLFVPNE 278


>ref|NP_001239777.1| omega-3 fatty acid desaturase, chloroplastic-like [Glycine max]
           gi|255634917|gb|ACU17817.1| unknown [Glycine max]
           gi|332183197|gb|AEE25912.1| chloroplast fatty acid
           desaturase 8 [Glycine max]
          Length = 453

 Score =  181 bits (458), Expect = 7e-44
 Identities = 78/88 (88%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERLFRSLDSVTRTLRFTAPFPLLA 181
           LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPE++F+SLD+VTR LRFT PFPLLA
Sbjct: 193 LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNVTRILRFTLPFPLLA 252

Query: 182 YPVYLWSRSPGKTGSHFHPSSDLFVPNE 265
           YP+YLWSRSPGKTGSHF+P SDLFVP+E
Sbjct: 253 YPIYLWSRSPGKTGSHFNPDSDLFVPSE 280


>ref|NP_001238609.1| fatty acid desaturase 8 [Glycine max] gi|213053824|gb|ACJ39217.1|
           fatty acid desaturase 8 [Glycine max]
          Length = 452

 Score =  181 bits (458), Expect = 7e-44
 Identities = 78/88 (88%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERLFRSLDSVTRTLRFTAPFPLLA 181
           LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPE++F+SLD+VTR LRFT PFPLLA
Sbjct: 192 LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNVTRILRFTLPFPLLA 251

Query: 182 YPVYLWSRSPGKTGSHFHPSSDLFVPNE 265
           YP+YLWSRSPGKTGSHF+P SDLFVP+E
Sbjct: 252 YPIYLWSRSPGKTGSHFNPDSDLFVPSE 279


>gb|ABU96743.1| chloroplast omega-3 fatty acid desaturase [Jatropha curcas]
          Length = 446

 Score =  181 bits (458), Expect = 7e-44
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +2

Query: 2   LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERLFRSLDSVTRTLRFTAPFPLLA 181
           LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPE++FR+LD++TR LRFT PFP+LA
Sbjct: 187 LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLA 246

Query: 182 YPVYLWSRSPGKTGSHFHPSSDLFVPNE 265
           YP YLW+RSPGKTGSHFHP SDLF+PNE
Sbjct: 247 YPFYLWNRSPGKTGSHFHPDSDLFLPNE 274


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