BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032628
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi...   185   2e-52
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   175   3e-49
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   175   3e-49
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   173   6e-49
ref|NP_174678.2| pentatricopeptide repeat-containing protein [Ar...   151   2e-42

>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Vitis vinifera]
          Length = 573

 Score =  185 bits (470), Expect(2) = 2e-52
 Identities = 88/112 (78%), Positives = 102/112 (91%)
 Frame = -2

Query: 406 DVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIKFRIKGHGYVAETNLVLHDI 227
           DV+KVPGFSY E++G IHKF+NGDQSHP+ +EIYAKLDEI+FRIK  GYVAET+LVLHDI
Sbjct: 434 DVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAETSLVLHDI 493

Query: 226 GEEDKENALHYHSEKLAVAYGLISTVDETPIQVIKNLRICGDCHAVIKIISR 71
           GEEDKENAL +HSEKLAVA+GLIST + TPI+V KNLRICGDCH VIK+IS+
Sbjct: 494 GEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVVIKLISK 545



 Score = 45.4 bits (106), Expect(2) = 2e-52
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -1

Query: 74  KIYNREIIVRDRARFHRFKGGICS 3
           KIY++EIIVRDRARFHRFK G CS
Sbjct: 545 KIYDQEIIVRDRARFHRFKDGSCS 568


>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  175 bits (444), Expect(2) = 3e-49
 Identities = 83/119 (69%), Positives = 99/119 (83%)
 Frame = -2

Query: 406 DVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIKFRIKGHGYVAETNLVLHDI 227
           DVKK PGFSY EI G+++KF+NGDQSH + +EIYAKLDEI  RIK +GY A+T+ VLHDI
Sbjct: 437 DVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDI 496

Query: 226 GEEDKENALHYHSEKLAVAYGLISTVDETPIQVIKNLRICGDCHAVIKIISRFIIGRLL 50
           G+EDKENAL YHSEKLAVA+GL  T + TPIQVIKNLRICGDCH VIK+IS+  I  ++
Sbjct: 497 GDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREII 555



 Score = 45.1 bits (105), Expect(2) = 3e-49
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -1

Query: 74  KIYNREIIVRDRARFHRFKGGICS 3
           KIY REIIVRDR RFHRFK G+CS
Sbjct: 548 KIYIREIIVRDRTRFHRFKEGLCS 571


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  175 bits (444), Expect(2) = 3e-49
 Identities = 83/119 (69%), Positives = 99/119 (83%)
 Frame = -2

Query: 406 DVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIKFRIKGHGYVAETNLVLHDI 227
           DVKK PGFSY EI G+++KF+NGDQSH + +EIYAKLDEI  RIK +GY A+T+ VLHDI
Sbjct: 437 DVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDI 496

Query: 226 GEEDKENALHYHSEKLAVAYGLISTVDETPIQVIKNLRICGDCHAVIKIISRFIIGRLL 50
           G+EDKENAL YHSEKLAVA+GL  T + TPIQVIKNLRICGDCH VIK+IS+  I  ++
Sbjct: 497 GDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREII 555



 Score = 45.1 bits (105), Expect(2) = 3e-49
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -1

Query: 74  KIYNREIIVRDRARFHRFKGGICS 3
           KIY REIIVRDR RFHRFK G+CS
Sbjct: 548 KIYIREIIVRDRTRFHRFKEGLCS 571


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  173 bits (439), Expect(2) = 6e-49
 Identities = 84/112 (75%), Positives = 97/112 (86%)
 Frame = -2

Query: 406 DVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIKFRIKGHGYVAETNLVLHDI 227
           DVKKVPG SY E +G IHKF N D+SH + +EIYAKLDEI+FR+K +GYVAET+ VLHDI
Sbjct: 439 DVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSFVLHDI 498

Query: 226 GEEDKENALHYHSEKLAVAYGLISTVDETPIQVIKNLRICGDCHAVIKIISR 71
           GEEDKEN L +HSEKLAVA+GLIST + TPIQVIKNLRICGDCH VIK+IS+
Sbjct: 499 GEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISK 550



 Score = 45.8 bits (107), Expect(2) = 6e-49
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -1

Query: 74  KIYNREIIVRDRARFHRFKGGICS 3
           KIY+REIIVRDR RFHRFK G CS
Sbjct: 550 KIYDREIIVRDRVRFHRFKEGFCS 573


>ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g34160 gi|332193557|gb|AEE31678.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 581

 Score =  151 bits (382), Expect(2) = 2e-42
 Identities = 73/114 (64%), Positives = 89/114 (78%), Gaps = 3/114 (2%)
 Frame = -2

Query: 403 VKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIKFRIKGHGYVAETNLVLHDIG 224
           VKK+PG SY E  G IH+F N D+SH   +EIY K+DEI+F+I+  GYVA+T LVLHDIG
Sbjct: 440 VKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIG 499

Query: 223 EEDKENALHYHSEKLAVAYGLI---STVDETPIQVIKNLRICGDCHAVIKIISR 71
           EE+KENAL YHSEKLAVAYGL+      +E+P++VI NLRICGDCH V K IS+
Sbjct: 500 EEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISK 553



 Score = 46.2 bits (108), Expect(2) = 2e-42
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = -1

Query: 86  KNYIKIYNREIIVRDRARFHRFKGGICS 3
           K+  KIY REIIVRDR RFHRFK G CS
Sbjct: 549 KHISKIYKREIIVRDRVRFHRFKDGSCS 576