BLASTX nr result

ID: Glycyrrhiza24_contig00032619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032619
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   110   9e-23
ref|XP_003610927.1| Pentatricopeptide repeat-containing protein ...   105   4e-21
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   104   9e-21
emb|CBI25911.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19

>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  110 bits (276), Expect = 9e-23
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = -2

Query: 266 PIKVFKNLRTCVDCHTAMKYISKIVQRKIILRDSNRFHCFEDGSCSCKDYW 114
           PIKVFKNLRTCVDCHTA+KYISKIVQRKI +RDSNRFHCFEDGSCSCKDYW
Sbjct: 643 PIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693


>ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512262|gb|AES93885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = -2

Query: 266 PIKVFKNLRTCVDCHTAMKYISKIVQRKIILRDSNRFHCFEDGSCSCKDY 117
           PIKVFKNLRTCVDCH AMKYISKIVQRKII+RDSNRFHCF DGSCSCKDY
Sbjct: 619 PIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  104 bits (259), Expect = 9e-21
 Identities = 44/50 (88%), Positives = 49/50 (98%)
 Frame = -2

Query: 263 IKVFKNLRTCVDCHTAMKYISKIVQRKIILRDSNRFHCFEDGSCSCKDYW 114
           IKVFKNLRTCVDCHTA+K+ISKI +RKII+RDSNRFHCFEDGSCSC+DYW
Sbjct: 238 IKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 287


>emb|CBI25911.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score =  104 bits (259), Expect = 9e-21
 Identities = 44/50 (88%), Positives = 49/50 (98%)
 Frame = -2

Query: 263 IKVFKNLRTCVDCHTAMKYISKIVQRKIILRDSNRFHCFEDGSCSCKDYW 114
           IKVFKNLRTCVDCHTA+K+ISKI +RKII+RDSNRFHCFEDGSCSC+DYW
Sbjct: 239 IKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 288


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  100 bits (249), Expect = 1e-19
 Identities = 43/51 (84%), Positives = 46/51 (90%)
 Frame = -2

Query: 266 PIKVFKNLRTCVDCHTAMKYISKIVQRKIILRDSNRFHCFEDGSCSCKDYW 114
           PIKVFKNLRTCVDCH A+K+IS I  RKII+RDSNRFHCFE GSCSCKDYW
Sbjct: 674 PIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724


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