BLASTX nr result

ID: Glycyrrhiza24_contig00032616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032616
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776...   192   2e-47
sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-prote...   192   3e-47
dbj|BAH86605.1| U-box protein with unknown function [Lotus japon...   192   3e-47
ref|XP_003591660.1| U-box domain-containing protein [Medicago tr...   190   9e-47
sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protei...   190   9e-47

>ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776142 [Glycine max]
          Length = 1481

 Score =  192 bits (488), Expect = 2e-47
 Identities = 96/103 (93%), Positives = 97/103 (94%)
 Frame = -1

Query: 310  SVVAVDIMKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLLYLNGQVLSGHSDGTIKV 131
            S VA DIMK LLNLNSVDVTELWSCKEVVELDLSSNGEVL LLY+NGQVLSGHSDGTIKV
Sbjct: 1167 STVAADIMKTLLNLNSVDVTELWSCKEVVELDLSSNGEVLCLLYMNGQVLSGHSDGTIKV 1226

Query: 130  WDARKRIPRVIQETREHTKAVTSLCSSVDRLYSGSLDKTIRVW 2
            WDARKRIPRVIQET EHTKAVTSLCSS DRLYSGSLDKTIRVW
Sbjct: 1227 WDARKRIPRVIQETHEHTKAVTSLCSSDDRLYSGSLDKTIRVW 1269


>sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1; AltName:
            Full=Protein cerberus
          Length = 1485

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/103 (92%), Positives = 99/103 (96%)
 Frame = -1

Query: 310  SVVAVDIMKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLLYLNGQVLSGHSDGTIKV 131
            SVVAVDIMK +LNL SVDVTELWSCKEVVELDLSSNGEVLS++YLNGQVLSGH+DGTIKV
Sbjct: 1171 SVVAVDIMKVILNLKSVDVTELWSCKEVVELDLSSNGEVLSMVYLNGQVLSGHTDGTIKV 1230

Query: 130  WDARKRIPRVIQETREHTKAVTSLCSSVDRLYSGSLDKTIRVW 2
            WDARKRIPRVIQET EHTKAVTSLCSS DRLYSGSLDKTIRVW
Sbjct: 1231 WDARKRIPRVIQETHEHTKAVTSLCSSGDRLYSGSLDKTIRVW 1273


>dbj|BAH86605.1| U-box protein with unknown function [Lotus japonicus]
            gi|254749430|dbj|BAH86606.1| U-box protein with unknown
            function [Lotus japonicus]
          Length = 1477

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/103 (92%), Positives = 99/103 (96%)
 Frame = -1

Query: 310  SVVAVDIMKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLLYLNGQVLSGHSDGTIKV 131
            SVVAVDIMK +LNL SVDVTELWSCKEVVELDLSSNGEVLS++YLNGQVLSGH+DGTIKV
Sbjct: 1163 SVVAVDIMKVILNLKSVDVTELWSCKEVVELDLSSNGEVLSMVYLNGQVLSGHTDGTIKV 1222

Query: 130  WDARKRIPRVIQETREHTKAVTSLCSSVDRLYSGSLDKTIRVW 2
            WDARKRIPRVIQET EHTKAVTSLCSS DRLYSGSLDKTIRVW
Sbjct: 1223 WDARKRIPRVIQETHEHTKAVTSLCSSGDRLYSGSLDKTIRVW 1265


>ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula]
            gi|358346073|ref|XP_003637097.1| U-box domain-containing
            protein [Medicago truncatula] gi|355480708|gb|AES61911.1|
            U-box domain-containing protein [Medicago truncatula]
            gi|355503032|gb|AES84235.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 1490

 Score =  190 bits (483), Expect = 9e-47
 Identities = 95/103 (92%), Positives = 98/103 (95%)
 Frame = -1

Query: 310  SVVAVDIMKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLLYLNGQVLSGHSDGTIKV 131
            S VA DI+KALLNLNSVDVTELWSCKEVVELDLSSNGEVLSL YLNGQVLSGH+DGTIKV
Sbjct: 1176 STVAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGTIKV 1235

Query: 130  WDARKRIPRVIQETREHTKAVTSLCSSVDRLYSGSLDKTIRVW 2
            WDARKRIPRVIQETREH KAVTSLCSSVD+LYS SLDKTIRVW
Sbjct: 1236 WDARKRIPRVIQETREHKKAVTSLCSSVDKLYSSSLDKTIRVW 1278


>sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protein ligase LIN; Short=MtLIN
            gi|219522090|gb|ACL14419.1| putative E3 ubiquitin ligase
            [Medicago truncatula] gi|219522092|gb|ACL14420.1|
            putative E3 ubiquitin ligase [Medicago truncatula]
          Length = 1488

 Score =  190 bits (483), Expect = 9e-47
 Identities = 95/103 (92%), Positives = 98/103 (95%)
 Frame = -1

Query: 310  SVVAVDIMKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLLYLNGQVLSGHSDGTIKV 131
            S VA DI+KALLNLNSVDVTELWSCKEVVELDLSSNGEVLSL YLNGQVLSGH+DGTIKV
Sbjct: 1174 STVAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGTIKV 1233

Query: 130  WDARKRIPRVIQETREHTKAVTSLCSSVDRLYSGSLDKTIRVW 2
            WDARKRIPRVIQETREH KAVTSLCSSVD+LYS SLDKTIRVW
Sbjct: 1234 WDARKRIPRVIQETREHKKAVTSLCSSVDKLYSSSLDKTIRVW 1276


Top