BLASTX nr result

ID: Glycyrrhiza24_contig00032613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032613
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542094.1| PREDICTED: uncharacterized WD repeat-contain...   268   3e-70
ref|XP_003597706.1| WD repeat-containing protein [Medicago trunc...   260   9e-68
emb|CBI36104.3| unnamed protein product [Vitis vinifera]              241   6e-62
ref|XP_002279039.1| PREDICTED: uncharacterized WD repeat-contain...   241   6e-62
ref|XP_002303299.1| predicted protein [Populus trichocarpa] gi|2...   240   8e-62

>ref|XP_003542094.1| PREDICTED: uncharacterized WD repeat-containing protein
           all2124-like [Glycine max]
          Length = 441

 Score =  268 bits (685), Expect = 3e-70
 Identities = 125/135 (92%), Positives = 129/135 (95%)
 Frame = -3

Query: 407 LKCIETIKAHPEPINAIIVADDGVLYTASDDATVRVWRRNFCSHDHPHSLTVTLHAKHSP 228
           +KCIETIKAH EPINAIIVADDGVLYTASDDATVRVWRRNFCSHD PHSLTVTLHAK+SP
Sbjct: 234 MKCIETIKAHTEPINAIIVADDGVLYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSP 293

Query: 227 VKALTLTPDGGILYGGCTDGYIHYWLNGWFAGQLQYGGSIQGHTHAVMCLASVAKFVVSG 48
           VKALTLTPD GILYGGCTDGYIHYW  GWFAGQLQYGGSIQGHTHAV+CLASVAK+VVSG
Sbjct: 294 VKALTLTPDAGILYGGCTDGYIHYWHKGWFAGQLQYGGSIQGHTHAVLCLASVAKYVVSG 353

Query: 47  SADSTSRVWGREQDG 3
           SADSTSRVW REQDG
Sbjct: 354 SADSTSRVWAREQDG 368


>ref|XP_003597706.1| WD repeat-containing protein [Medicago truncatula]
           gi|355486754|gb|AES67957.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 436

 Score =  260 bits (664), Expect = 9e-68
 Identities = 121/136 (88%), Positives = 130/136 (95%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407 LKCIETIKAHPEPINAIIVADDGVLYTASDDATVRVWRRNFCSHDHPHSLTVTLHAKHSP 228
           LKCIETIKAHP+PIN +IV+DDGVLYTASDDAT++VWRRNFCSHD PHSLTVTLHAK+SP
Sbjct: 220 LKCIETIKAHPDPINDMIVSDDGVLYTASDDATIKVWRRNFCSHDQPHSLTVTLHAKYSP 279

Query: 227 VKALTLTP-DGGILYGGCTDGYIHYWLNGWFAGQLQYGGSIQGHTHAVMCLASVAKFVVS 51
           VKALTLT  DGGILYGGCTDGYIHYWL GWFAGQLQYGGSIQGHTHAV+CLASVAK+VVS
Sbjct: 280 VKALTLTNNDGGILYGGCTDGYIHYWLKGWFAGQLQYGGSIQGHTHAVLCLASVAKYVVS 339

Query: 50  GSADSTSRVWGREQDG 3
           GSADSTSRVW RE+DG
Sbjct: 340 GSADSTSRVWSRERDG 355


>emb|CBI36104.3| unnamed protein product [Vitis vinifera]
          Length = 923

 Score =  241 bits (614), Expect = 6e-62
 Identities = 109/134 (81%), Positives = 122/134 (91%)
 Frame = -3

Query: 404 KCIETIKAHPEPINAIIVADDGVLYTASDDATVRVWRRNFCSHDHPHSLTVTLHAKHSPV 225
           KCIETI+AH +P+NAI+VADDGVLYTASDDATVRVWRRNFCS D PHSLTVTL AK+SPV
Sbjct: 231 KCIETIQAHTDPVNAIVVADDGVLYTASDDATVRVWRRNFCSGDRPHSLTVTLPAKNSPV 290

Query: 224 KALTLTPDGGILYGGCTDGYIHYWLNGWFAGQLQYGGSIQGHTHAVMCLASVAKFVVSGS 45
           K L+LT DG +LYGGCTDGYIHYW  GWF+GQLQYGG++QGHTHAVMCLASV+ +V+SGS
Sbjct: 291 KTLSLTGDGAVLYGGCTDGYIHYWHKGWFSGQLQYGGALQGHTHAVMCLASVSNYVISGS 350

Query: 44  ADSTSRVWGREQDG 3
           ADST RVW REQDG
Sbjct: 351 ADSTCRVWTREQDG 364


>ref|XP_002279039.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466
           [Vitis vinifera]
          Length = 427

 Score =  241 bits (614), Expect = 6e-62
 Identities = 109/134 (81%), Positives = 122/134 (91%)
 Frame = -3

Query: 404 KCIETIKAHPEPINAIIVADDGVLYTASDDATVRVWRRNFCSHDHPHSLTVTLHAKHSPV 225
           KCIETI+AH +P+NAI+VADDGVLYTASDDATVRVWRRNFCS D PHSLTVTL AK+SPV
Sbjct: 231 KCIETIQAHTDPVNAIVVADDGVLYTASDDATVRVWRRNFCSGDRPHSLTVTLPAKNSPV 290

Query: 224 KALTLTPDGGILYGGCTDGYIHYWLNGWFAGQLQYGGSIQGHTHAVMCLASVAKFVVSGS 45
           K L+LT DG +LYGGCTDGYIHYW  GWF+GQLQYGG++QGHTHAVMCLASV+ +V+SGS
Sbjct: 291 KTLSLTGDGAVLYGGCTDGYIHYWHKGWFSGQLQYGGALQGHTHAVMCLASVSNYVISGS 350

Query: 44  ADSTSRVWGREQDG 3
           ADST RVW REQDG
Sbjct: 351 ADSTCRVWTREQDG 364


>ref|XP_002303299.1| predicted protein [Populus trichocarpa] gi|222840731|gb|EEE78278.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  240 bits (613), Expect = 8e-62
 Identities = 104/135 (77%), Positives = 124/135 (91%)
 Frame = -3

Query: 407 LKCIETIKAHPEPINAIIVADDGVLYTASDDATVRVWRRNFCSHDHPHSLTVTLHAKHSP 228
           LKCIETI+AH EP+NA++VADDG+LYTASDDA++RVWRRNFCS + PHSLTVTL +KHSP
Sbjct: 36  LKCIETIQAHLEPVNAVVVADDGILYTASDDASIRVWRRNFCSGEWPHSLTVTLSSKHSP 95

Query: 227 VKALTLTPDGGILYGGCTDGYIHYWLNGWFAGQLQYGGSIQGHTHAVMCLASVAKFVVSG 48
           V+ LTLT D G+LYGGCTDGYIHYWL GWF GQLQYGG++QGHTHA+MC+A+V+K+V+SG
Sbjct: 96  VRTLTLTSDNGVLYGGCTDGYIHYWLKGWFPGQLQYGGALQGHTHAIMCMANVSKYVISG 155

Query: 47  SADSTSRVWGREQDG 3
           SADSTSRVW R+ DG
Sbjct: 156 SADSTSRVWVRDSDG 170


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