BLASTX nr result

ID: Glycyrrhiza24_contig00032602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032602
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4...   122   3e-26
emb|CBI36841.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   113   1e-23
ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4...   111   7e-23
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   108   5e-22

>ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1504

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/86 (70%), Positives = 63/86 (73%)
 Frame = -2

Query: 259  LELLGSFFFCISTMFMIILPSSIIKPEXXXXXXXXXXXXXXXLFWCVFQSCIIENKLVSV 80
            LELLGSF FCIS MFMIILPSSIIKPE               LFW VF SC IENK+VSV
Sbjct: 1171 LELLGSFVFCISAMFMIILPSSIIKPENVGLSLSYGLSLNASLFWAVFMSCFIENKMVSV 1230

Query: 79   ERI*QFTNIPSEPAWKIKDHVPPSNW 2
            ERI QFTNIPSEPAW IKD +PPSNW
Sbjct: 1231 ERIKQFTNIPSEPAWNIKDRMPPSNW 1256


>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/86 (61%), Positives = 62/86 (72%)
 Frame = -2

Query: 259  LELLGSFFFCISTMFMIILPSSIIKPEXXXXXXXXXXXXXXXLFWCVFQSCIIENKLVSV 80
            LEL+GSF  C+STMFMI+LPSSIIKPE               LFW ++ SC +ENK+VSV
Sbjct: 746  LELIGSFIMCLSTMFMILLPSSIIKPENVGLSLSYGLSLNSVLFWAIYMSCFVENKMVSV 805

Query: 79   ERI*QFTNIPSEPAWKIKDHVPPSNW 2
            ERI QFTNIPSE AW+IKD +PP NW
Sbjct: 806  ERIKQFTNIPSEAAWQIKDRLPPPNW 831


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/86 (61%), Positives = 62/86 (72%)
 Frame = -2

Query: 259  LELLGSFFFCISTMFMIILPSSIIKPEXXXXXXXXXXXXXXXLFWCVFQSCIIENKLVSV 80
            LEL+GSF  C+STMFMI+LPSSIIKPE               LFW ++ SC +ENK+VSV
Sbjct: 1176 LELIGSFIMCLSTMFMILLPSSIIKPENVGLSLSYGLSLNSVLFWAIYMSCFVENKMVSV 1235

Query: 79   ERI*QFTNIPSEPAWKIKDHVPPSNW 2
            ERI QFTNIPSE AW+IKD +PP NW
Sbjct: 1236 ERIKQFTNIPSEAAWQIKDRLPPPNW 1261


>ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/86 (60%), Positives = 61/86 (70%)
 Frame = -2

Query: 259  LELLGSFFFCISTMFMIILPSSIIKPEXXXXXXXXXXXXXXXLFWCVFQSCIIENKLVSV 80
            LELLGS  FC+S MFMI+LPSSIIKPE               +FW ++ SC IENK+VSV
Sbjct: 1168 LELLGSLVFCLSAMFMIMLPSSIIKPENVGLSLSYGLSLNAVMFWAIYMSCFIENKMVSV 1227

Query: 79   ERI*QFTNIPSEPAWKIKDHVPPSNW 2
            ERI QFTNIPSE +W IKD +PP+NW
Sbjct: 1228 ERIKQFTNIPSEASWNIKDRLPPANW 1253


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  108 bits (270), Expect = 5e-22
 Identities = 49/86 (56%), Positives = 61/86 (70%)
 Frame = -2

Query: 259  LELLGSFFFCISTMFMIILPSSIIKPEXXXXXXXXXXXXXXXLFWCVFQSCIIENKLVSV 80
            LEL+GSF  C+S MF+I+LPSSII+PE               LFW ++ SC +EN++VSV
Sbjct: 1173 LELMGSFILCMSAMFLIVLPSSIIRPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSV 1232

Query: 79   ERI*QFTNIPSEPAWKIKDHVPPSNW 2
            ERI QFTNIPSE AWKIKD +PP +W
Sbjct: 1233 ERIKQFTNIPSEAAWKIKDRIPPPSW 1258


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