BLASTX nr result

ID: Glycyrrhiza24_contig00032597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032597
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630706.1| Multidrug and toxin extrusion protein [Medic...   125   5e-27
ref|XP_003530088.1| PREDICTED: LOW QUALITY PROTEIN: multidrug an...   122   3e-26
ref|XP_003524407.1| PREDICTED: multidrug and toxin extrusion pro...   115   4e-24
emb|CBI27993.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002280364.1| PREDICTED: multidrug and toxin extrusion pro...   115   5e-24

>ref|XP_003630706.1| Multidrug and toxin extrusion protein [Medicago truncatula]
           gi|355524728|gb|AET05182.1| Multidrug and toxin
           extrusion protein [Medicago truncatula]
          Length = 447

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   SGLSLGMEPLCSQAYGANRPKLLSLTLHRCTLFLLSCSLPISFLWLDMSRIFLSLHQEEK 180
           SGLSLGMEPLCSQA+GANRPKLLSLTL RC LFLL CS+PISF+WL+MS+I + LHQ  K
Sbjct: 80  SGLSLGMEPLCSQAFGANRPKLLSLTLQRCILFLLLCSIPISFMWLNMSQILIWLHQNPK 139

Query: 181 ITRTAQTYLIFLLPDLVT 234
           IT  A TYLIF LPDL+T
Sbjct: 140 ITAMAHTYLIFSLPDLIT 157


>ref|XP_003530088.1| PREDICTED: LOW QUALITY PROTEIN: multidrug and toxin extrusion
           protein 2-like [Glycine max]
          Length = 564

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   SGLSLGMEPLCSQAYGANRPKLLSLTLHRCTLFLLSCSLPISFLWLDMSRIFLSLHQEEK 180
           SGLSLGMEPLCSQA+GA RPKLLSLTL RC +FLL  S+PIS LWL+MS++F+ LHQ   
Sbjct: 160 SGLSLGMEPLCSQAFGAKRPKLLSLTLQRCVIFLLFSSIPISLLWLNMSKVFILLHQHTH 219

Query: 181 ITRTAQTYLIFLLPDLVT 234
           IT+ AQTYL+FLLPDLVT
Sbjct: 220 ITQMAQTYLVFLLPDLVT 237


>ref|XP_003524407.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 493

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/78 (70%), Positives = 64/78 (82%)
 Frame = +1

Query: 1   SGLSLGMEPLCSQAYGANRPKLLSLTLHRCTLFLLSCSLPISFLWLDMSRIFLSLHQEEK 180
           SGL+LGMEP+CSQA+GA R K+LSLTLHRC +FLL CS+PIS LWL+MS I L LHQ+  
Sbjct: 87  SGLALGMEPMCSQAFGAKRVKVLSLTLHRCVMFLLVCSIPISLLWLNMSSILLLLHQDPN 146

Query: 181 ITRTAQTYLIFLLPDLVT 234
           IT  A TYLIF LPDL+T
Sbjct: 147 ITLMAHTYLIFSLPDLLT 164


>emb|CBI27993.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/78 (71%), Positives = 64/78 (82%)
 Frame = +1

Query: 1   SGLSLGMEPLCSQAYGANRPKLLSLTLHRCTLFLLSCSLPISFLWLDMSRIFLSLHQEEK 180
           SGL+LGMEPLCSQA+GA RPKLLSLTLHR  +FLL  S+PIS LWL+MS+I L LHQ+  
Sbjct: 113 SGLALGMEPLCSQAFGAQRPKLLSLTLHRSVIFLLFSSVPISLLWLNMSKILLYLHQDPD 172

Query: 181 ITRTAQTYLIFLLPDLVT 234
           ITR A TYL+F LPDL T
Sbjct: 173 ITRIAHTYLVFSLPDLFT 190


>ref|XP_002280364.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Vitis
           vinifera]
          Length = 608

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/78 (71%), Positives = 64/78 (82%)
 Frame = +1

Query: 1   SGLSLGMEPLCSQAYGANRPKLLSLTLHRCTLFLLSCSLPISFLWLDMSRIFLSLHQEEK 180
           SGL+LGMEPLCSQA+GA RPKLLSLTLHR  +FLL  S+PIS LWL+MS+I L LHQ+  
Sbjct: 191 SGLALGMEPLCSQAFGAQRPKLLSLTLHRSVIFLLFSSVPISLLWLNMSKILLYLHQDPD 250

Query: 181 ITRTAQTYLIFLLPDLVT 234
           ITR A TYL+F LPDL T
Sbjct: 251 ITRIAHTYLVFSLPDLFT 268


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