BLASTX nr result

ID: Glycyrrhiza24_contig00032590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032590
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_003603474.1| Pentatricopeptide repeat-containing protein ...   171   7e-41
ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   163   2e-38
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...   162   3e-38
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37

>ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Glycine max]
          Length = 732

 Score =  173 bits (439), Expect = 1e-41
 Identities = 81/110 (73%), Positives = 92/110 (83%)
 Frame = -3

Query: 330 CCKTYRVGRALELFEDMKKRGIVPNRVTYDSLIRYYSAVSEVDRAIEVLREMQRLNHGRP 151
           CCKT RV RALELF+DMK+RG+VPNRVTY   IRYY  V+E+D+ +E+LREMQRL HG P
Sbjct: 577 CCKTLRVERALELFDDMKRRGLVPNRVTYGCFIRYYCVVNEIDKGVEMLREMQRLGHGVP 636

Query: 150 GSSSYTPIIHTLCEGGRVVDAWRFLTELVDVGLVPREYTYRLVCDKLRLA 1
           GSSSYTPIIH LCE GRVV+AW FL ELV+ G VPREYTY LVCD+LR A
Sbjct: 637 GSSSYTPIIHALCEAGRVVEAWWFLVELVEGGSVPREYTYGLVCDRLRAA 686


>ref|XP_003603474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492522|gb|AES73725.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 528

 Score =  171 bits (432), Expect = 7e-41
 Identities = 85/115 (73%), Positives = 93/115 (80%), Gaps = 6/115 (5%)
 Frame = -3

Query: 330 CCKTYRVGRALELFEDMKKRGIVPNRVTYDSLIRYYSAVSEVDRAIEVLREMQRLNH-GR 154
           CCKTYRVGRALELF+DMKKRG VPNRVTYDS IRYYS V+E+D+A+E LREMQR N+ G 
Sbjct: 281 CCKTYRVGRALELFDDMKKRGCVPNRVTYDSFIRYYSVVNEIDKAVEFLREMQRSNYDGE 340

Query: 153 PG-----SSSYTPIIHTLCEGGRVVDAWRFLTELVDVGLVPREYTYRLVCDKLRL 4
            G      SSYTPIIH LCE GRV DAW FL EL+D G VPREYTY+LVCD LRL
Sbjct: 341 NGIVVGSCSSYTPIIHALCEVGRVADAWSFLVELIDNGSVPREYTYKLVCDGLRL 395


>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/110 (68%), Positives = 93/110 (84%)
 Frame = -3

Query: 330 CCKTYRVGRALELFEDMKKRGIVPNRVTYDSLIRYYSAVSEVDRAIEVLREMQRLNHGRP 151
           CCKTYR+ RALELF+DM KRG VPNRVTY+S IRYYSAV+E+D+A+++L +M+ +NHG P
Sbjct: 285 CCKTYRIERALELFDDMNKRGCVPNRVTYNSFIRYYSAVNEIDKAVDMLCKMKEMNHGIP 344

Query: 150 GSSSYTPIIHTLCEGGRVVDAWRFLTELVDVGLVPREYTYRLVCDKLRLA 1
            +SSYTPIIH LCE GR+++A  FL ELVD G VPREYTY++VCD LR A
Sbjct: 345 TTSSYTPIIHALCETGRILEARDFLIELVDGGSVPREYTYKVVCDSLRSA 394


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/110 (68%), Positives = 91/110 (82%)
 Frame = -3

Query: 330 CCKTYRVGRALELFEDMKKRGIVPNRVTYDSLIRYYSAVSEVDRAIEVLREMQRLNHGRP 151
           CCKTYR+ RALELFEDM +RG VPNRVTY+S IRYYSAV+E+D+A+E+LR MQ +NHG  
Sbjct: 294 CCKTYRIERALELFEDMNRRGCVPNRVTYNSFIRYYSAVNEIDKAVEMLRRMQNMNHGLA 353

Query: 150 GSSSYTPIIHTLCEGGRVVDAWRFLTELVDVGLVPREYTYRLVCDKLRLA 1
            SSSYTPIIH LCE  RV++A  FL ELVD G +PREYTY+LVC+ ++ A
Sbjct: 354 TSSSYTPIIHALCEADRVLEARDFLLELVDGGSIPREYTYKLVCETMKSA 403


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/110 (68%), Positives = 92/110 (83%)
 Frame = -3

Query: 330 CCKTYRVGRALELFEDMKKRGIVPNRVTYDSLIRYYSAVSEVDRAIEVLREMQRLNHGRP 151
           CCKTYR+ RALELFEDM KRG  PNR+TY+S IRYYSAV+E+D+AI++LR MQ++NHG  
Sbjct: 299 CCKTYRIQRALELFEDMSKRGCTPNRLTYNSFIRYYSAVNEIDQAIKMLRMMQKMNHGIA 358

Query: 150 GSSSYTPIIHTLCEGGRVVDAWRFLTELVDVGLVPREYTYRLVCDKLRLA 1
            SSSYTPIIH LCEGG+V++A  FL EL++ G VPREYTY+LVC+ L  A
Sbjct: 359 TSSSYTPIIHALCEGGKVIEARDFLLELLEEGSVPREYTYQLVCNLLNSA 408


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