BLASTX nr result

ID: Glycyrrhiza24_contig00032588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032588
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517612.1| PREDICTED: microtubule-associated protein SP...    80   1e-13
ref|XP_002308133.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_004139086.1| PREDICTED: microtubule-associated protein TO...    74   1e-11
ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, ...    74   1e-11
emb|CBI24067.3| unnamed protein product [Vitis vinifera]               73   3e-11

>ref|XP_003517612.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Glycine
           max]
          Length = 805

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -2

Query: 203 LQKVNMKSTSGRIPLSVRKACQNDVGHHHHLKTDDWHVEIAVPRTHSVAEFHNEESESSS 24
           +QKVNMKST GRIP SV+   +N+     H K DDW V++AVPR HS+ EF N+ESES S
Sbjct: 324 IQKVNMKSTMGRIPFSVKNYARNN-----HQKPDDWDVQVAVPRPHSLVEFQNKESESCS 378

Query: 23  VTK-PLET 3
           VTK PLET
Sbjct: 379 VTKQPLET 386


>ref|XP_002308133.1| predicted protein [Populus trichocarpa] gi|222854109|gb|EEE91656.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = -2

Query: 218 QRDVKLQKVNMKSTSGRIPLSVRKACQNDVGHHHHLKTDDWHVEIAVPRTH--SVAEFHN 45
           +++  L+ V   ST  R PLS  KACQN V  HH  KTD+WH+EI+VP+ H  S+A+  N
Sbjct: 336 RKEATLKNVVSDSTKRRAPLSATKACQNYVDSHHP-KTDNWHIEISVPKKHNISLADLQN 394

Query: 44  EESESSSVTKPLE 6
           EESE SS+TK LE
Sbjct: 395 EESEGSSITKTLE 407


>ref|XP_004139086.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus] gi|449476175|ref|XP_004154662.1| PREDICTED:
           microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus]
          Length = 828

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
 Frame = -2

Query: 227 ESRQRDVKLQKVNMKSTSGRIPLSVRKACQNDVGHHHHLKTDDWHVEIAVP--RTHSVAE 54
           E  +RD  +++V + ST GRIPL++RK C+N + +  H K +D H+EIAVP  R  S++ 
Sbjct: 333 EHGKRDAAIKRVGLGSTRGRIPLNMRKTCRNYLENTQHFKANDCHIEIAVPEKRNQSLSG 392

Query: 53  FHNEESESSSVTKPLE 6
           FH EESE S+VTK  +
Sbjct: 393 FHTEESEGSTVTKTFQ 408


>ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus
           communis] gi|223532788|gb|EEF34566.1|
           Microtubule-associated protein TORTIFOLIA1, putative
           [Ricinus communis]
          Length = 840

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
 Frame = -2

Query: 227 ESRQRDVKLQKVNMKSTSGRIPLSVRKACQNDVGHHHHLKTDDWHVEIAVPRTH--SVAE 54
           +S +++V  +K        RIPLSV+K CQN +   HH K DDW +EIAVP++H  S+A+
Sbjct: 340 DSARKEVTPKKAVTDLAKRRIPLSVKKTCQNYLDSQHH-KADDWQIEIAVPKSHNVSLAD 398

Query: 53  FHNEESESSSVTKPLE 6
             NEESE SS+TK LE
Sbjct: 399 LRNEESEGSSITKTLE 414


>emb|CBI24067.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
 Frame = -2

Query: 227 ESRQRDVKLQKVNMKSTS-GRIPLSVRKACQNDVGHHHHLKTDDWHVEIAVPRTHSVA-- 57
           +S  +D  L+KV   +    RIPLSVRK CQN V +  H K +DW++EIAV + H+V+  
Sbjct: 332 DSGWKDAMLKKVATDTIKMRRIPLSVRKTCQNYVENPQHSKANDWNIEIAVSKAHNVSLT 391

Query: 56  EFHNEESESSSVTKPLE 6
           + HNEESE SSVTK LE
Sbjct: 392 DVHNEESEGSSVTKTLE 408


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