BLASTX nr result
ID: Glycyrrhiza24_contig00032587
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00032587
(306 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi... 196 2e-48
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi... 145 3e-33
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera] 145 3e-33
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 134 6e-30
ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|2... 133 2e-29
>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 196 bits (497), Expect = 2e-48
Identities = 96/102 (94%), Positives = 99/102 (97%)
Frame = +1
Query: 1 DFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASK 180
DFNQTTLSTVLKSVASL AIK CKQIHT+S+KSGIYSDFYVINSLLDTYGKC+HIDEASK
Sbjct: 382 DFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASK 441
Query: 181 IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADIK 306
IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQ ADIK
Sbjct: 442 IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIK 483
Score = 72.8 bits (177), Expect = 3e-11
Identities = 34/89 (38%), Positives = 58/89 (65%)
Frame = +1
Query: 22 STVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTW 201
S++L + A+L A + KQ+H ++K G D + NSL++ Y KC I++A + F E
Sbjct: 490 SSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPN 549
Query: 202 EDLVAYTSMITAYSQYGDGEEALKLYLQM 288
+V++++MI Y+Q+G G+EAL+L+ QM
Sbjct: 550 RGIVSWSAMIGGYAQHGHGKEALRLFNQM 578
Score = 68.6 bits (166), Expect = 5e-10
Identities = 32/99 (32%), Positives = 60/99 (60%)
Frame = +1
Query: 7 NQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIF 186
N TLS+ LK+ A++ + +Q+H+ +K +SD + L+D Y KC +D+A + +
Sbjct: 283 NMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAY 342
Query: 187 EERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADI 303
+ +D++A+ ++I+ YSQ GD +A+ L+ +M DI
Sbjct: 343 DSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDI 381
>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 145 bits (366), Expect = 3e-33
Identities = 66/101 (65%), Positives = 85/101 (84%)
Frame = +1
Query: 4 FNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKI 183
FNQTTLST+LKS A L + C+Q+H LSVKSG +SD YV+NSL+D+YGKCSH+++A +I
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517
Query: 184 FEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADIK 306
FEE T DLV++TSMITAY+QYG GEEALKL+L+MQ ++K
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 558
Score = 69.7 bits (169), Expect = 2e-10
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = +1
Query: 22 STVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTW 201
S++L + A+L A + KQ+H +K G D + NSL++ Y KC ID+A + F E T
Sbjct: 565 SSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE 624
Query: 202 EDLVAYTSMITAYSQYGDGEEALKLYLQM 288
+V++++MI +Q+G G +AL+L+ QM
Sbjct: 625 RGIVSWSAMIGGLAQHGHGRQALQLFNQM 653
Score = 65.5 bits (158), Expect = 4e-09
Identities = 34/99 (34%), Positives = 58/99 (58%)
Frame = +1
Query: 7 NQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIF 186
N TLS+ LK+ A + + +Q+H+ +K + SD +V L+D Y KC +++A F
Sbjct: 358 NIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF 417
Query: 187 EERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADI 303
+DL+A+ ++I+ YSQY + EAL L+++M I
Sbjct: 418 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 456
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/100 (30%), Positives = 58/100 (58%)
Frame = +1
Query: 7 NQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIF 186
N+ T S+VLK+ + + ++ KQ+H + V SG D +V N+L+ Y KC ++ ++F
Sbjct: 156 NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLF 215
Query: 187 EERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADIK 306
+E ++V++ ++ + Y Q EA+ L+ +M + IK
Sbjct: 216 DEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK 255
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/95 (30%), Positives = 52/95 (54%)
Frame = +1
Query: 22 STVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTW 201
S +L + +++ QIH KSG+ D + N L++ Y KC + A K+ +E +
Sbjct: 60 SKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSE 119
Query: 202 EDLVAYTSMITAYSQYGDGEEALKLYLQMQHADIK 306
DLV+++++I+ Y+Q G G AL + +M +K
Sbjct: 120 PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154
>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 145 bits (366), Expect = 3e-33
Identities = 66/101 (65%), Positives = 85/101 (84%)
Frame = +1
Query: 4 FNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKI 183
FNQTTLST+LKS A L + C+Q+H LSVKSG +SD YV+NSL+D+YGKCSH+++A +I
Sbjct: 431 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 490
Query: 184 FEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADIK 306
FEE T DLV++TSMITAY+QYG GEEALKL+L+MQ ++K
Sbjct: 491 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 531
Score = 69.7 bits (169), Expect = 2e-10
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = +1
Query: 22 STVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTW 201
S++L + A+L A + KQ+H +K G D + NSL++ Y KC ID+A + F E T
Sbjct: 538 SSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE 597
Query: 202 EDLVAYTSMITAYSQYGDGEEALKLYLQM 288
+V++++MI +Q+G G +AL+L+ QM
Sbjct: 598 RGIVSWSAMIGGLAQHGHGRQALQLFNQM 626
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/100 (30%), Positives = 58/100 (58%)
Frame = +1
Query: 7 NQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIF 186
N+ T S+VLK+ + + ++ KQ+H + V SG D +V N+L+ Y KC ++ ++F
Sbjct: 156 NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLF 215
Query: 187 EERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADIK 306
+E ++V++ ++ + Y Q EA+ L+ +M + IK
Sbjct: 216 DEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255
Score = 57.4 bits (137), Expect = 1e-06
Identities = 27/78 (34%), Positives = 47/78 (60%)
Frame = +1
Query: 70 KQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQY 249
+Q+H+ +K + SD +V L+D Y KC +++A F +DL+A+ ++I+ YSQY
Sbjct: 352 RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQY 411
Query: 250 GDGEEALKLYLQMQHADI 303
+ EAL L+++M I
Sbjct: 412 WEDMEALSLFVEMHKEGI 429
>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 134 bits (338), Expect = 6e-30
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +1
Query: 1 DFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASK 180
+FNQTTLST+LKS A A C+Q+HT+S+KSG D YV NSLLD+YGKC +++A+K
Sbjct: 387 EFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAK 446
Query: 181 IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADIK 306
+FE EDLVAYTSMITAYSQYG GEEALK+YL+MQ DIK
Sbjct: 447 VFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIK 488
Score = 77.0 bits (188), Expect = 1e-12
Identities = 37/89 (41%), Positives = 59/89 (66%)
Frame = +1
Query: 22 STVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTW 201
S++ + A+L A + KQIH +K G+ SD + NSL++ Y KC ID+AS IF E +W
Sbjct: 495 SSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISW 554
Query: 202 EDLVAYTSMITAYSQYGDGEEALKLYLQM 288
+V++++MI +Q+G G +AL+L+ QM
Sbjct: 555 RGIVSWSAMIGGLAQHGHGRKALQLFYQM 583
Score = 60.5 bits (145), Expect = 1e-07
Identities = 29/91 (31%), Positives = 53/91 (58%)
Frame = +1
Query: 16 TLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIFEER 195
TLS+ LK+ A++ +K +Q+H+ +K + D +V L+D Y KC + +A +F+
Sbjct: 291 TLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 196 TWEDLVAYTSMITAYSQYGDGEEALKLYLQM 288
+D++ + S+I+ YS G EA+ L+ M
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNM 381
>ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|222848084|gb|EEE85631.1|
predicted protein [Populus trichocarpa]
Length = 786
Score = 133 bits (334), Expect = 2e-29
Identities = 63/101 (62%), Positives = 81/101 (80%)
Frame = +1
Query: 4 FNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKI 183
FNQTTLSTVLKS+A+L A C+QIH LS+KSG D YV+NSL+DTYGKC H+++A+++
Sbjct: 311 FNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRV 370
Query: 184 FEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQHADIK 306
FEE DLV +TS++TAY+Q G GEEAL+LYL+MQ IK
Sbjct: 371 FEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIK 411
Score = 67.8 bits (164), Expect = 9e-10
Identities = 35/89 (39%), Positives = 56/89 (62%)
Frame = +1
Query: 22 STVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTW 201
S++L + ASL A + KQ+H +K G SD + NSL++ Y KC I++AS F
Sbjct: 418 SSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477
Query: 202 EDLVAYTSMITAYSQYGDGEEALKLYLQM 288
+V++++MI +Q+G G+EAL+L+ QM
Sbjct: 478 RGIVSWSAMIGGLAQHGYGKEALQLFKQM 506
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/91 (31%), Positives = 55/91 (60%)
Frame = +1
Query: 7 NQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLDTYGKCSHIDEASKIF 186
N TLS+ LK+ A + + +Q+H+ +K + SD ++ L+D Y KC+ +D+A +F
Sbjct: 211 NMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVF 270
Query: 187 EERTWEDLVAYTSMITAYSQYGDGEEALKLY 279
+ D++A+ ++I+ +SQ + EEA L+
Sbjct: 271 KLMPERDMIAWNAVISGHSQNEEDEEAASLF 301