BLASTX nr result

ID: Glycyrrhiza24_contig00032585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032585
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71259.1| hypothetical protein [Trifolium pratense]              79   3e-13
ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica] g...    72   6e-11
ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002524436.1| nucleic acid binding protein, putative [Rici...    64   1e-08
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>dbj|BAE71259.1| hypothetical protein [Trifolium pratense]
          Length = 553

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/94 (40%), Positives = 57/94 (60%)
 Frame = +1

Query: 7   TAYEAELWGVLDGLKLAKAKGFERIKLCVDSASVVAGLQGSTLGCVRGADQLLRKIKELL 186
           +A  AELWGV +GL  A+  GF  ++L VDS  VV  ++        G   L++ I+ +L
Sbjct: 433 SAIIAELWGVAEGLSYARRLGFTAVELNVDSVVVVQAIKTGRFSSSVGLP-LVKHIRRML 491

Query: 187 RMDWHVDISHVYREANKCADLLASLGCSSDKHWV 288
            +DW + I H YRE+NKCAD +A++GC  D+  +
Sbjct: 492 DLDWEIKIEHAYRESNKCADAMANIGCHLDRETI 525


>ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica]
           gi|401661941|emb|CBX33402.1| rnaseH (mitochondrion)
           [Malus x domestica]
          Length = 153

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/86 (44%), Positives = 53/86 (61%)
 Frame = +1

Query: 19  AELWGVLDGLKLAKAKGFERIKLCVDSASVVAGLQGSTLGCVRGADQLLRKIKELLRMDW 198
           AELWG+  GL+LA  +GF  +++ VDSA+VV  L       +     L+R  +  L+MDW
Sbjct: 37  AELWGLFFGLRLAWMRGFRSVEVEVDSATVVT-LVNQQDNSLHPLHTLIRGCQAYLKMDW 95

Query: 199 HVDISHVYREANKCADLLASLGCSSD 276
           H  +SH+YRE N  AD LAS+G + D
Sbjct: 96  HCKLSHIYREKNFSADYLASIGLTYD 121


>ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|222865680|gb|EEF02811.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/90 (42%), Positives = 54/90 (60%)
 Frame = +1

Query: 7   TAYEAELWGVLDGLKLAKAKGFERIKLCVDSASVVAGLQGSTLGCVRGADQLLRKIKELL 186
           ++  AELW V  GL+LA  +GF ++ L  DS  VV  + G ++   R  + ++ +IK++L
Sbjct: 124 SSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYN-IIMQIKDML 182

Query: 187 RMDWHVDISHVYREANKCADLLASLGCSSD 276
             DW V   HVYREAN  AD LA+ G S D
Sbjct: 183 GRDWEVTTYHVYREANCVADWLANYGLSRD 212


>ref|XP_002524436.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536224|gb|EEF37876.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 101

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/80 (41%), Positives = 47/80 (58%)
 Frame = +1

Query: 19  AELWGVLDGLKLAKAKGFERIKLCVDSASVVAGLQGSTLGCVRGADQLLRKIKELLRMDW 198
           AE W   +GLKLA   G+  + + VDS  +VAG   +   C+     L+   +EL+R DW
Sbjct: 2   AECWAACEGLKLAWNMGYRELIVEVDS-KLVAGWLNADQTCMNDCSNLIYACRELIRKDW 60

Query: 199 HVDISHVYREANKCADLLAS 258
           +VD+ HV+RE N  AD LA+
Sbjct: 61  NVDVRHVFREGNMIADSLAN 80


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/90 (41%), Positives = 53/90 (58%)
 Frame = +1

Query: 7   TAYEAELWGVLDGLKLAKAKGFERIKLCVDSASVVAGLQGSTLGCVRGADQLLRKIKELL 186
           ++  AELW V  GL+LA  +GF ++ L  DS  VV  + G ++   R  + ++ +IK +L
Sbjct: 124 SSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYN-IIMQIKGML 182

Query: 187 RMDWHVDISHVYREANKCADLLASLGCSSD 276
             DW V   HVYREAN  AD LA+ G + D
Sbjct: 183 GRDWEVTTYHVYREANCVADWLANYGLTRD 212


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