BLASTX nr result

ID: Glycyrrhiza24_contig00032580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032580
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523727.1| conserved hypothetical protein [Ricinus comm...   104   7e-21
ref|XP_002314306.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267...    96   2e-18
emb|CAN59836.1| hypothetical protein VITISV_017622 [Vitis vinifera]    96   2e-18
ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp....    91   7e-17

>ref|XP_002523727.1| conserved hypothetical protein [Ricinus communis]
           gi|223537031|gb|EEF38667.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1233

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/95 (56%), Positives = 66/95 (69%), Gaps = 5/95 (5%)
 Frame = -1

Query: 271 LPAVKLPEIEVAGPVQSSSWSLLRIGGARYYESSKGLLQSGFCATEKFLLKWTIYLEKQK 92
           LPAV+LPE    GPVQSSSWSL+R+GGARYYE +KGLLQSGF A++KFLLKWTI LEK  
Sbjct: 701 LPAVQLPEQSNVGPVQSSSWSLIRVGGARYYEPAKGLLQSGFSASQKFLLKWTIVLEKPV 760

Query: 91  RPNGSTEIIVKQSPVTR-----APKVEYNEDAKKT 2
            PNG     ++Q  V R       +++   D K+T
Sbjct: 761 SPNGLPAKTMRQGSVIRQGIDSLAEIDAKVDGKRT 795


>ref|XP_002314306.1| predicted protein [Populus trichocarpa] gi|222850714|gb|EEE88261.1|
           predicted protein [Populus trichocarpa]
          Length = 869

 Score =  100 bits (250), Expect = 9e-20
 Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 5/95 (5%)
 Frame = -1

Query: 271 LPAVKLPEIEVAGPVQSSSWSLLRIGGARYYESSKGLLQSGFCATEKFLLKWTIYLEKQK 92
           LPA++LPE    GP+QSSSWSL+R+ G RYYE SKGLLQSGF +T KFL KWTI+LEK  
Sbjct: 540 LPAIQLPEGSNIGPIQSSSWSLIRVAGTRYYEPSKGLLQSGFSSTHKFLSKWTIFLEKPT 599

Query: 91  RPNGSTEIIVKQSPVTRA---PKVEYNEDA--KKT 2
             NG     + Q  V R+   P+VE+N D   KKT
Sbjct: 600 NLNGLPASNLLQGSVIRSSSDPQVEFNGDVDRKKT 634


>ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267175 [Vitis vinifera]
          Length = 1226

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/78 (57%), Positives = 60/78 (76%)
 Frame = -1

Query: 271 LPAVKLPEIEVAGPVQSSSWSLLRIGGARYYESSKGLLQSGFCATEKFLLKWTIYLEKQK 92
           LPA++LP++  AGP+Q  SW+L+R+GG +YYE SKGLLQSGF AT+KFLLKW I+LEK +
Sbjct: 692 LPALQLPKMIDAGPIQPLSWNLIRVGGTKYYEPSKGLLQSGFHATQKFLLKWIIFLEKHR 751

Query: 91  RPNGSTEIIVKQSPVTRA 38
             NGS    V+Q  + R+
Sbjct: 752 IQNGSPVSAVQQGSLIRS 769


>emb|CAN59836.1| hypothetical protein VITISV_017622 [Vitis vinifera]
          Length = 1252

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/78 (57%), Positives = 60/78 (76%)
 Frame = -1

Query: 271 LPAVKLPEIEVAGPVQSSSWSLLRIGGARYYESSKGLLQSGFCATEKFLLKWTIYLEKQK 92
           LPA++LP++  AGP+Q  SW+L+R+GG +YYE SKGLLQSGF AT+KFLLKW I+LEK +
Sbjct: 539 LPALQLPKMIDAGPIQPLSWNLIRVGGTKYYEPSKGLLQSGFHATQKFLLKWIIFLEKHR 598

Query: 91  RPNGSTEIIVKQSPVTRA 38
             NGS    V+Q  + R+
Sbjct: 599 IQNGSPVSAVQQGSLIRS 616


>ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324950|gb|EFH55370.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1189

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 5/92 (5%)
 Frame = -1

Query: 271 LPAVKLPEIEVAGPVQSSSWSLLRIGGARYYESSKGLLQSGFCATEKFLLKWTIYLEKQK 92
           LP+VKLPEI  AGP+ SSSWSL+R+GG+RYYE SKGLLQSGF A +KFLLK  +  +K  
Sbjct: 678 LPSVKLPEIAHAGPIISSSWSLVRVGGSRYYEPSKGLLQSGFSAIQKFLLKLVLSSQKDD 737

Query: 91  RPNG-----STEIIVKQSPVTRAPKVEYNEDA 11
            PN      S +  + ++ VT A  +  N D+
Sbjct: 738 APNDLLVGESEKACISRANVTMAKTIRTNIDS 769


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