BLASTX nr result
ID: Glycyrrhiza24_contig00032566
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032566 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica... 110 1e-22 ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica... 108 3e-22 ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu... 85 7e-15 ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [M... 80 2e-13 ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 >ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine max] Length = 1164 Score = 110 bits (275), Expect = 1e-22 Identities = 55/66 (83%), Positives = 58/66 (87%) Frame = -2 Query: 199 LHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYG 20 L RQNP VDEVTRI I+QILEQFRAS DEVYKFDAGLSNQERA VHQ++ KMG RSKSYG Sbjct: 18 LFRQNPNVDEVTRICISQILEQFRASNDEVYKFDAGLSNQERALVHQMALKMGFRSKSYG 77 Query: 19 LGNERR 2 LG ERR Sbjct: 78 LGKERR 83 >ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine max] Length = 1162 Score = 108 bits (271), Expect = 3e-22 Identities = 54/66 (81%), Positives = 57/66 (86%) Frame = -2 Query: 199 LHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYG 20 L RQNP VDEVTRIRI+QILE FRAS DEVYKFDA LSNQERA VHQ++ KMG RSKSYG Sbjct: 17 LFRQNPNVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERALVHQMALKMGFRSKSYG 76 Query: 19 LGNERR 2 LG ERR Sbjct: 77 LGKERR 82 >ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1229 Score = 84.7 bits (208), Expect = 7e-15 Identities = 39/62 (62%), Positives = 53/62 (85%) Frame = -2 Query: 187 NPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYGLGNE 8 NP V E TRIRI+QILEQFRA+KD+V+ F+A LSN+ERA VH++ +K+G++SKS G G++ Sbjct: 13 NPNVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHEVCKKLGMKSKSTGRGHQ 72 Query: 7 RR 2 RR Sbjct: 73 RR 74 >ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula] gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula] Length = 1190 Score = 80.1 bits (196), Expect = 2e-13 Identities = 38/65 (58%), Positives = 48/65 (73%) Frame = -2 Query: 196 HRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYGL 17 + Q K+DE TR RI + LE F++S +E YKF+AGLSN +R F H L+QKMG +SKSYG Sbjct: 18 YAQPTKIDESTRRRIIRTLESFQSSDEEEYKFEAGLSNDDRRFAHLLAQKMGFKSKSYGT 77 Query: 16 GNERR 2 G ERR Sbjct: 78 GKERR 82 >ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1| predicted protein [Populus trichocarpa] Length = 1195 Score = 80.1 bits (196), Expect = 2e-13 Identities = 37/64 (57%), Positives = 52/64 (81%) Frame = -2 Query: 193 RQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYGLG 14 +QNP+V E T IRI++ILE+FRA+ D+VY F+A LSN +RA VH++ +KMG++SKS G G Sbjct: 12 QQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMGMKSKSSGRG 71 Query: 13 NERR 2 +RR Sbjct: 72 GQRR 75