BLASTX nr result

ID: Glycyrrhiza24_contig00032566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032566
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica...   110   1e-22
ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica...   108   3e-22
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu...    85   7e-15
ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [M...    80   2e-13
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
           max]
          Length = 1164

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/66 (83%), Positives = 58/66 (87%)
 Frame = -2

Query: 199 LHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYG 20
           L RQNP VDEVTRI I+QILEQFRAS DEVYKFDAGLSNQERA VHQ++ KMG RSKSYG
Sbjct: 18  LFRQNPNVDEVTRICISQILEQFRASNDEVYKFDAGLSNQERALVHQMALKMGFRSKSYG 77

Query: 19  LGNERR 2
           LG ERR
Sbjct: 78  LGKERR 83


>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
           max]
          Length = 1162

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/66 (81%), Positives = 57/66 (86%)
 Frame = -2

Query: 199 LHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYG 20
           L RQNP VDEVTRIRI+QILE FRAS DEVYKFDA LSNQERA VHQ++ KMG RSKSYG
Sbjct: 17  LFRQNPNVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERALVHQMALKMGFRSKSYG 76

Query: 19  LGNERR 2
           LG ERR
Sbjct: 77  LGKERR 82


>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1229

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/62 (62%), Positives = 53/62 (85%)
 Frame = -2

Query: 187 NPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYGLGNE 8
           NP V E TRIRI+QILEQFRA+KD+V+ F+A LSN+ERA VH++ +K+G++SKS G G++
Sbjct: 13  NPNVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHEVCKKLGMKSKSTGRGHQ 72

Query: 7   RR 2
           RR
Sbjct: 73  RR 74


>ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 1190

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = -2

Query: 196 HRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYGL 17
           + Q  K+DE TR RI + LE F++S +E YKF+AGLSN +R F H L+QKMG +SKSYG 
Sbjct: 18  YAQPTKIDESTRRRIIRTLESFQSSDEEEYKFEAGLSNDDRRFAHLLAQKMGFKSKSYGT 77

Query: 16  GNERR 2
           G ERR
Sbjct: 78  GKERR 82


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
           predicted protein [Populus trichocarpa]
          Length = 1195

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/64 (57%), Positives = 52/64 (81%)
 Frame = -2

Query: 193 RQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMGLRSKSYGLG 14
           +QNP+V E T IRI++ILE+FRA+ D+VY F+A LSN +RA VH++ +KMG++SKS G G
Sbjct: 12  QQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMGMKSKSSGRG 71

Query: 13  NERR 2
            +RR
Sbjct: 72  GQRR 75


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