BLASTX nr result

ID: Glycyrrhiza24_contig00032543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032543
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819...   139   3e-31
ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812...   136   2e-30
ref|XP_003638519.1| DNA polymerase III subunit gamma/tau [Medica...   112   4e-23
ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808...   100   9e-20
ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...   100   2e-19

>ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819111 [Glycine max]
          Length = 952

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/102 (68%), Positives = 81/102 (79%)
 Frame = -2

Query: 307 NKSPSESCGSNNGGKGLDLVCVVPPIDNFKDGESHHIPAARSSQLGRIDHSKSAKKPLRK 128
           +KSPSESCGSN+GGKGLDL C+V P +NFKDG+S ++  ARSSQLGRID SKSAKK LRK
Sbjct: 131 DKSPSESCGSNHGGKGLDLACIVLPSNNFKDGDSCYVGTARSSQLGRIDCSKSAKKSLRK 190

Query: 127 NKVKPSEGVGGIASHLGSPCLSVCDAFSPHSPSACVNQDFDV 2
           N+V PSE  G IAS+ GSPC S  DAFSP+  S  +NQD DV
Sbjct: 191 NQVNPSELAGSIASNEGSPCPSGYDAFSPYCASVGINQDVDV 232


>ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812040 [Glycine max]
          Length = 979

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/102 (68%), Positives = 80/102 (78%)
 Frame = -2

Query: 307 NKSPSESCGSNNGGKGLDLVCVVPPIDNFKDGESHHIPAARSSQLGRIDHSKSAKKPLRK 128
           +KSPSESCGSN GGKGLDL C+V P +NFKDG+S +I  ARSSQLGR D+SKSAKK LRK
Sbjct: 132 DKSPSESCGSNLGGKGLDLSCIVLPSNNFKDGDSCYIETARSSQLGRTDYSKSAKKSLRK 191

Query: 127 NKVKPSEGVGGIASHLGSPCLSVCDAFSPHSPSACVNQDFDV 2
           N+VKPSE    IAS+ GSPC S  DAFSP+S    +NQD DV
Sbjct: 192 NQVKPSEVAISIASNEGSPCPSGYDAFSPYSAKVGINQDVDV 233


>ref|XP_003638519.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355504454|gb|AES85657.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 903

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/102 (57%), Positives = 74/102 (72%)
 Frame = -2

Query: 307 NKSPSESCGSNNGGKGLDLVCVVPPIDNFKDGESHHIPAARSSQLGRIDHSKSAKKPLRK 128
           NKSPSESCGSN+GGKGLD       I++FKDG  ++    RSS+LGR+DH+K A+K LRK
Sbjct: 106 NKSPSESCGSNHGGKGLD-------INDFKDGGLYYREIGRSSKLGRMDHAKPARKLLRK 158

Query: 127 NKVKPSEGVGGIASHLGSPCLSVCDAFSPHSPSACVNQDFDV 2
           N+VKPS+ VG IAS+L +PC  V +A SP    A VN+DF V
Sbjct: 159 NQVKPSDVVGDIASNLSTPCPCVRNALSPQGSLALVNKDFGV 200


>ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808544 [Glycine max]
          Length = 976

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = -2

Query: 307 NKSPSESCGSNNGGKGLDLVCVVPPIDNFKDGESHHIPAARSSQLGRIDHSKSAKKPLRK 128
           +KS +ESC SN+ G+GLDLV ++P  ++ KDGES ++  A      R++HSKSA+K LRK
Sbjct: 130 DKSSNESCCSNHEGRGLDLVSIMPSSNHLKDGESCYLSTAT-----RVEHSKSARKSLRK 184

Query: 127 NKVKPSEGVGGIASHLGS-PCLSVCDAFSPHSPSACVNQDFDV 2
           N+VKPSE +G IASH+GS  CLSV DA S  S S  + QD DV
Sbjct: 185 NQVKPSEVIGDIASHVGSQQCLSVFDAPSARSASEHITQDEDV 227


>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = -2

Query: 307 NKSPSESCGSNNGGKGLDLVCVVPPIDNFKDGESHHIPAARSSQLGRIDHSKSAKKPLRK 128
           +KSP+ESC SN+ G+GLDLV ++P  ++ KDGES ++  A      R++HSKSA+K L K
Sbjct: 130 DKSPNESCCSNHEGRGLDLVSIMPSSNHLKDGESCYLSIAT-----RVEHSKSARKSLCK 184

Query: 127 NKVKPSEGVGGIASHLGS-PCLSVCDAFSPHSPSACVNQDFDV 2
           N+VKPSE +G IASH+GS  CLSV DA S  S S  + Q+ DV
Sbjct: 185 NQVKPSEVIGDIASHVGSQQCLSVFDACSARSASEHIAQEVDV 227


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