BLASTX nr result

ID: Glycyrrhiza24_contig00032526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032526
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicag...   157   1e-36
ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...   139   2e-31
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   115   5e-24
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   112   4e-23
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   107   1e-21

>ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
            gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like
            protein [Medicago truncatula]
          Length = 1758

 Score =  157 bits (396), Expect = 1e-36
 Identities = 79/108 (73%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1    MEAVVNLSAESPFDGNKEKSAAEC-MTFSNYFNKRYGITLRHPGQPLLWLKQGHNPHNLF 177
            ++ V N SAESPFDGN +KS AE  MTF+ YF KRYGITLRHP QPLL LKQGHN HNLF
Sbjct: 987  IDVVDNSSAESPFDGNSDKSGAEDKMTFTQYFQKRYGITLRHPEQPLLRLKQGHNAHNLF 1046

Query: 178  LNSHEEDARDKSSQIGLGIPKVPAHVHMPPELLCLLDVKRDVLRSMYL 321
            LN  EED  DKSSQ+G   PKVP HVH+P ELLCLLDVKRDV +SMYL
Sbjct: 1047 LNLPEEDGGDKSSQVGPVAPKVPVHVHIPSELLCLLDVKRDVYKSMYL 1094


>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/102 (68%), Positives = 82/102 (80%)
 Frame = +1

Query: 16   NLSAESPFDGNKEKSAAECMTFSNYFNKRYGITLRHPGQPLLWLKQGHNPHNLFLNSHEE 195
            NLSAESPF GN EKS  E +TFS+YF+K YGI+LRHPGQP+L LKQ HNPHNL  N +EE
Sbjct: 945  NLSAESPFYGNNEKSK-ESITFSDYFSKSYGISLRHPGQPMLRLKQSHNPHNLLFNFYEE 1003

Query: 196  DARDKSSQIGLGIPKVPAHVHMPPELLCLLDVKRDVLRSMYL 321
               DKSS+IG    K+P HVH+PPELL +LDVKRDVL+S+YL
Sbjct: 1004 ---DKSSKIGPAASKLPVHVHIPPELLYILDVKRDVLKSLYL 1042


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/107 (52%), Positives = 70/107 (65%)
 Frame = +1

Query: 1   MEAVVNLSAESPFDGNKEKSAAECMTFSNYFNKRYGITLRHPGQPLLWLKQGHNPHNLFL 180
           +E V N SAESPFDGN +K   + +TF++YFNKRYGI+L  P QPLL LKQ HNPHNL +
Sbjct: 649 VEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGISLSFPKQPLLRLKQSHNPHNLLV 708

Query: 181 NSHEEDARDKSSQIGLGIPKVPAHVHMPPELLCLLDVKRDVLRSMYL 321
           N  +E         G    +   HVHMPPEL+  +DV + VL+S YL
Sbjct: 709 NFKDEGNTSDKLPSGPAFKRPQMHVHMPPELVLSMDVPKGVLKSSYL 755


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/107 (53%), Positives = 71/107 (66%)
 Frame = +1

Query: 1    MEAVVNLSAESPFDGNKEKSAAECMTFSNYFNKRYGITLRHPGQPLLWLKQGHNPHNLFL 180
            +E V N SAESPFDGN +K   + +TF++YFNKRYGI+L  P QPLL LKQ HNPHNL +
Sbjct: 921  VEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGISLSFPKQPLLRLKQSHNPHNLLV 980

Query: 181  NSHEEDARDKSSQIGLGIPKVPAHVHMPPELLCLLDVKRDVLRSMYL 321
            N  +E      S  G    +   HVHMPPEL+  +DV + VL+S YL
Sbjct: 981  NFKDEGFDKLPS--GPAFKRPQMHVHMPPELVLSMDVPKGVLKSSYL 1025


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/107 (50%), Positives = 71/107 (66%)
 Frame = +1

Query: 1    MEAVVNLSAESPFDGNKEKSAAECMTFSNYFNKRYGITLRHPGQPLLWLKQGHNPHNLFL 180
            +EAV + +AES F    +  ++E   F  YF K+Y I L+HPGQPL+ LKQ HNPHNL +
Sbjct: 928  IEAVSDKTAESSFAETVDTVSSEFANFYEYFYKKYNIVLKHPGQPLMLLKQSHNPHNLLV 987

Query: 181  NSHEEDARDKSSQIGLGIPKVPAHVHMPPELLCLLDVKRDVLRSMYL 321
            N ++E    K+SQ G+   K   HVHMPPELL +LDV   VL+S+YL
Sbjct: 988  NFNDEGVSAKASQAGVVNEKPRFHVHMPPELLLVLDVPVSVLKSLYL 1034


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