BLASTX nr result

ID: Glycyrrhiza24_contig00032518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032518
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-...   225   3e-57
ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2...   222   2e-56
gb|ACN33812.1| unknown [Zea mays]                                     219   2e-55
ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays] ...   219   2e-55
ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-...   218   5e-55

>ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Glycine max]
          Length = 525

 Score =  225 bits (573), Expect = 3e-57
 Identities = 104/112 (92%), Positives = 107/112 (95%)
 Frame = +2

Query: 2   PCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQ 181
           PCRVKFYTQEIVFFRQDMLYRMRRSCLMPPS EET D F+HLVATITHQSHLCPLPLTVQ
Sbjct: 401 PCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQ 460

Query: 182 PIIWNYDHCLNLYPTPHAIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAY 337
           PIIWNYDHCL LYPTPH IVLGDRSQQKAFKYTGITCFNTGSF+ID+TFVAY
Sbjct: 461 PIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFAIDNTFVAY 512


>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  222 bits (566), Expect = 2e-56
 Identities = 101/112 (90%), Positives = 106/112 (94%)
 Frame = +2

Query: 2   PCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQ 181
           PCRVKFYTQEIVFFR D+LYRMRRSCLMPPS EETDDPF+HLVATITHQSHLCPLPL VQ
Sbjct: 395 PCRVKFYTQEIVFFRHDLLYRMRRSCLMPPSTEETDDPFEHLVATITHQSHLCPLPLIVQ 454

Query: 182 PIIWNYDHCLNLYPTPHAIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAY 337
           PIIWNYDHCL+LYP+PH IVLGDRS+QKAFKYTGITCFN GSFS DSTFVAY
Sbjct: 455 PIIWNYDHCLHLYPSPHTIVLGDRSEQKAFKYTGITCFNPGSFSNDSTFVAY 506


>gb|ACN33812.1| unknown [Zea mays]
          Length = 533

 Score =  219 bits (557), Expect = 2e-55
 Identities = 98/112 (87%), Positives = 105/112 (93%)
 Frame = +2

Query: 2   PCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQ 181
           PCRVKFYTQEIVFFRQD+LYRMRRSCL+PP+ EET DPF+HLVATITHQSHLCPLPLTVQ
Sbjct: 408 PCRVKFYTQEIVFFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQ 467

Query: 182 PIIWNYDHCLNLYPTPHAIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAY 337
           PIIWNYDHCL LYPTPH IVLGD+S+QKAFKYTGITCFN GSF+ DSTF AY
Sbjct: 468 PIIWNYDHCLRLYPTPHTIVLGDKSEQKAFKYTGITCFNPGSFANDSTFAAY 519


>ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays]
           gi|195607112|gb|ACG25386.1| DNA polymerase epsilon
           subunit 2 [Zea mays] gi|414869832|tpg|DAA48389.1| TPA:
           DNA polymerase epsilon subunit 2 [Zea mays]
          Length = 533

 Score =  219 bits (557), Expect = 2e-55
 Identities = 98/112 (87%), Positives = 105/112 (93%)
 Frame = +2

Query: 2   PCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQ 181
           PCRVKFYTQEIVFFRQD+LYRMRRSCL+PP+ EET DPF+HLVATITHQSHLCPLPLTVQ
Sbjct: 408 PCRVKFYTQEIVFFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQ 467

Query: 182 PIIWNYDHCLNLYPTPHAIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAY 337
           PIIWNYDHCL LYPTPH IVLGD+S+QKAFKYTGITCFN GSF+ DSTF AY
Sbjct: 468 PIIWNYDHCLRLYPTPHTIVLGDKSEQKAFKYTGITCFNPGSFANDSTFAAY 519


>ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Cucumis sativus]
          Length = 536

 Score =  218 bits (554), Expect = 5e-55
 Identities = 97/112 (86%), Positives = 106/112 (94%)
 Frame = +2

Query: 2   PCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQ 181
           PCRV+FYTQEIVFFRQD+LYRMRRSCL+PPS EET DPF+HLVATITHQSHLCPLPL +Q
Sbjct: 413 PCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 472

Query: 182 PIIWNYDHCLNLYPTPHAIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAY 337
           PIIWNYDHCL+LYPTPH IVLGDRS+Q+AFKYTGITCFN GSF+ DSTFVAY
Sbjct: 473 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAY 524


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