BLASTX nr result

ID: Glycyrrhiza24_contig00032517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032517
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   191   4e-47
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...   181   7e-44
ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cuc...   178   5e-43
ref|NP_001049313.2| Os03g0205400 [Oryza sativa Japonica Group] g...   177   1e-42
dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]    176   2e-42

>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
            max]
          Length = 1707

 Score =  191 bits (486), Expect = 4e-47
 Identities = 97/99 (97%), Positives = 97/99 (97%)
 Frame = +1

Query: 1    ESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVLLFGARSV 180
            ESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLEL KLVDGVVTDDSDVLLFGARSV
Sbjct: 1016 ESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELEKLVDGVVTDDSDVLLFGARSV 1075

Query: 181  YKNIFDDRKYVETYLMEDIEKELGLTREKLIRMALLLGS 297
            YKNIFDDRKYVETY MEDIEKELGLTREKLIRMALLLGS
Sbjct: 1076 YKNIFDDRKYVETYFMEDIEKELGLTREKLIRMALLLGS 1114


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
            gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
            putative [Ricinus communis]
          Length = 1641

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/99 (89%), Positives = 95/99 (95%)
 Frame = +1

Query: 1    ESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVLLFGARSV 180
            ESV+SE+F ECQELLQMFGLPYIIAPMEAEAQCAY+ELA LVDGVVTDDSDV LFGAR+V
Sbjct: 960  ESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARNV 1019

Query: 181  YKNIFDDRKYVETYLMEDIEKELGLTREKLIRMALLLGS 297
            YKNIFDDRKYVETY M+DIE+ELGLTREKLIRMALLLGS
Sbjct: 1020 YKNIFDDRKYVETYFMKDIERELGLTREKLIRMALLLGS 1058


>ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
            gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair
            protein UVH3-like [Cucumis sativus]
          Length = 1541

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/99 (88%), Positives = 93/99 (93%)
 Frame = +1

Query: 1    ESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVLLFGARSV 180
            ESVNSE+F ECQELLQMFGLPYIIAPMEAEAQCAY+ELA LVDGVVTDDSDV LFGARSV
Sbjct: 882  ESVNSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSV 941

Query: 181  YKNIFDDRKYVETYLMEDIEKELGLTREKLIRMALLLGS 297
            YKNIFDDRKYVETY M+DIE ELGL R+KLI+MALLLGS
Sbjct: 942  YKNIFDDRKYVETYFMKDIEHELGLNRDKLIQMALLLGS 980


>ref|NP_001049313.2| Os03g0205400 [Oryza sativa Japonica Group]
            gi|255674294|dbj|BAF11227.2| Os03g0205400 [Oryza sativa
            Japonica Group]
          Length = 1470

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/99 (86%), Positives = 94/99 (94%)
 Frame = +1

Query: 1    ESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVLLFGARSV 180
            ESV+SE+F ECQELLQMFGLPYIIAPMEAEAQCAY+E+  LVDGVVTDDSDV LFGAR+V
Sbjct: 850  ESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMTNLVDGVVTDDSDVFLFGARNV 909

Query: 181  YKNIFDDRKYVETYLMEDIEKELGLTREKLIRMALLLGS 297
            YKNIFDDRKYVETYLM+DIE ELGLTRE+LIRMA+LLGS
Sbjct: 910  YKNIFDDRKYVETYLMKDIESELGLTREQLIRMAMLLGS 948


>dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1503

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/99 (86%), Positives = 94/99 (94%)
 Frame = +1

Query: 1    ESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVLLFGARSV 180
            ESV+SE+F ECQELLQMFGLPYIIAPMEAEAQCAY+E+  LVDGVVTDDSDV LFGAR+V
Sbjct: 869  ESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNV 928

Query: 181  YKNIFDDRKYVETYLMEDIEKELGLTREKLIRMALLLGS 297
            YKNIFDDRKYVETYLM+DIE ELGLTRE+LIRMA+LLGS
Sbjct: 929  YKNIFDDRKYVETYLMKDIESELGLTREQLIRMAMLLGS 967


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