BLASTX nr result

ID: Glycyrrhiza24_contig00032508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032508
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806...   165   3e-39
ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799...   165   4e-39
ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago trun...   154   1e-35
ref|XP_003638096.1| DNA damage-binding protein, partial [Medicag...   154   1e-35
ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus ...   118   4e-25

>ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
          Length = 1278

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/112 (75%), Positives = 92/112 (82%)
 Frame = -3

Query: 339 IAASAYEDRLALFSMSMTGGDIIDERIIYPSESEGTASTSRSIQKTSIRGTIWSMCFISL 160
           IA+SAYEDRLALFS+SM+ GDIIDERI+YPSE+EGTASTSRSIQ+  IRGTIWS+CFIS 
Sbjct: 165 IASSAYEDRLALFSLSMSSGDIIDERIVYPSENEGTASTSRSIQRIGIRGTIWSICFISQ 224

Query: 159 DSRQPSKEHNPVLAVIXXXXXXXXXXXXXXEWNVKAQTIFVISQYVEAGPLA 4
           DSRQPSKEHNPVLAVI              EWNVKA  IFVISQYVEAGPLA
Sbjct: 225 DSRQPSKEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLA 276


>ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
          Length = 1258

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/112 (76%), Positives = 93/112 (83%)
 Frame = -3

Query: 339 IAASAYEDRLALFSMSMTGGDIIDERIIYPSESEGTASTSRSIQKTSIRGTIWSMCFISL 160
           IAASAYEDRLALFS+SM+ GDIIDERI+YPSESEGTASTSRSIQ+TSI  TIWS+CFIS 
Sbjct: 165 IAASAYEDRLALFSLSMSSGDIIDERIVYPSESEGTASTSRSIQRTSISVTIWSICFISQ 224

Query: 159 DSRQPSKEHNPVLAVIXXXXXXXXXXXXXXEWNVKAQTIFVISQYVEAGPLA 4
           DSRQPSKEHNPVLA+I              EWNVKA+ IFVISQYVEAGPLA
Sbjct: 225 DSRQPSKEHNPVLALIINRREALLNELLLLEWNVKARKIFVISQYVEAGPLA 276


>ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
           gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor
           rse1 [Medicago truncatula]
          Length = 1370

 Score =  154 bits (388), Expect = 1e-35
 Identities = 84/114 (73%), Positives = 89/114 (78%), Gaps = 2/114 (1%)
 Frame = -3

Query: 339 IAASAYEDRLALFSMS--MTGGDIIDERIIYPSESEGTASTSRSIQKTSIRGTIWSMCFI 166
           IAASAYEDRLALFSMS  MTG DIIDERIIYPSESE TASTSR++QKTSI GTIWSMCFI
Sbjct: 161 IAASAYEDRLALFSMSTSMTGSDIIDERIIYPSESEETASTSRTMQKTSISGTIWSMCFI 220

Query: 165 SLDSRQPSKEHNPVLAVIXXXXXXXXXXXXXXEWNVKAQTIFVISQYVEAGPLA 4
           S+DSRQP K  NPVLA+I              EWNVKA  + VISQYVEAGPLA
Sbjct: 221 SVDSRQPIKGQNPVLAIILNRRGALLNELLLLEWNVKAHIVSVISQYVEAGPLA 274


>ref|XP_003638096.1| DNA damage-binding protein, partial [Medicago truncatula]
           gi|355504031|gb|AES85234.1| DNA damage-binding protein,
           partial [Medicago truncatula]
          Length = 822

 Score =  154 bits (388), Expect = 1e-35
 Identities = 84/114 (73%), Positives = 89/114 (78%), Gaps = 2/114 (1%)
 Frame = -3

Query: 339 IAASAYEDRLALFSMS--MTGGDIIDERIIYPSESEGTASTSRSIQKTSIRGTIWSMCFI 166
           IAASAYEDRLALFSMS  MTG DIIDERIIYPSESE TASTSR++QKTSI GTIWSMCFI
Sbjct: 161 IAASAYEDRLALFSMSTSMTGSDIIDERIIYPSESEETASTSRTMQKTSISGTIWSMCFI 220

Query: 165 SLDSRQPSKEHNPVLAVIXXXXXXXXXXXXXXEWNVKAQTIFVISQYVEAGPLA 4
           S+DSRQP K  NPVLA+I              EWNVKA  + VISQYVEAGPLA
Sbjct: 221 SVDSRQPIKGQNPVLAIILNRRGALLNELLLLEWNVKAHIVSVISQYVEAGPLA 274


>ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
           gi|223528782|gb|EEF30789.1| spliceosomal protein sap,
           putative [Ricinus communis]
          Length = 1220

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
 Frame = -3

Query: 339 IAASAYEDRLALFSMSMTGG-DIIDERIIYPSESEGTASTSRSIQKTSIRGTIWSMCFIS 163
           IA SAY DRLALFS+S+TG  DIIDE+I YP ESEG  S +RSIQ+ +I GTIWS+CFIS
Sbjct: 162 IATSAYVDRLALFSLSITGSSDIIDEQIFYPPESEGHTSFTRSIQRPNISGTIWSICFIS 221

Query: 162 LDSRQPSKEHNPVLAVIXXXXXXXXXXXXXXEWNVKAQTIFVISQYVEAGPL 7
            D  Q SKEHNPVLA+I              EWN++  TI VI   VEAGP+
Sbjct: 222 RDLSQSSKEHNPVLAIILNRSSELLNELLLLEWNIRGHTINVIPN-VEAGPI 272


Top